DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9222 and Smokl5

DIOPT Version :10

Sequence 1:NP_608999.2 Gene:CG9222 / 33867 FlyBaseID:FBgn0031784 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001417119.1 Gene:Smokl5 / 690235 RGDID:1582875 Length:502 Species:Rattus norvegicus


Alignment Length:309 Identity:107/309 - (34%)
Similarity:162/309 - (52%) Gaps:40/309 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NSGRRQEQKVYTFSDRPPQPKPPAPSGVVPVKADDKSKPQKTILEEHGIILGKVIGTGNYAKVKI 92
            :||..||      |:|.|               .:.|...::...::.|:  ..||.|.||.||:
  Rat     2 SSGSEQE------SERLP---------------SEGSSYTESFHSQYMIL--NTIGHGGYATVKL 43

  Fly    93 GFSEEYGKRVAVKIISKVKAPSEYTQKFLPREIEAVKGLHHENLITFYQSIETSHRVYLIMQLAE 157
            ......|..|||||:.|    .|:....:..|::.:..:||.|:|:.:|.|||..::||||:|||
  Rat    44 ALHRLTGTPVAVKILIK----KEHWCHPVTSEVDIMMSIHHPNIISLFQVIETKKKIYLIMELAE 104

  Fly   158 NGTLLDYVRERKFLDEPQSRTLFKQLVSAVEYIHSKGVVHRDIKCENLLLDENWNLKLIDFGFAR 222
            ...|...:||...|.|.::|.:|:||:||..|.|::|:||||:|.:|:::|....:|:||||.| 
  Rat   105 GKQLYHRIREAGQLQEDEARGIFRQLLSATGYCHARGIVHRDLKPDNIMIDTRGRIKIIDFGLA- 168

  Fly   223 KDTRTSDNQVILSKTFCGSYAYASPEILKGVAYDPFMSDIWACGVVCYAMVFGRLPYDGSNVHIL 287
              |.....|.:  :..||:||:|:||:|.|..|:....|:|..|||.|.|..||||:|.||:..|
  Rat   169 --THVRPGQKL--RYHCGTYAFAAPEMLLGKLYEGPKVDVWTLGVVLYCMTVGRLPFDDSNIPQL 229

  Fly   288 LKRINQSLVFPKSPSASSECKHMIMHILAPVKI----RYNIPQVKEDPW 332
            ..:: .|..:...|..|.|.|.|:..:|   |:    |..||.:...||
  Rat   230 RSQV-VSGKYAVPPGMSGELKDMLSLLL---KVNPQHRPTIPDLLTHPW 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9222NP_608999.2 STKc_TSSK4-like 75..333 CDD:271064 99/262 (38%)
Smokl5NP_001417119.1 None

Return to query results.
Submit another query.