DRSC/TRiP Functional Genomics Resources

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Protein Alignment tctn and Tctn2

DIOPT Version :9

Sequence 1:NP_608998.2 Gene:tctn / 33866 FlyBaseID:FBgn0261697 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001074251.1 Gene:Tctn2 / 689779 RGDID:1591895 Length:700 Species:Rattus norvegicus


Alignment Length:696 Identity:148/696 - (21%)
Similarity:228/696 - (32%) Gaps:224/696 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IGISHNYNATISPTASTTTEAPA-TTGAPSSETVS-SISTLPEA---EVTT------------TT 69
            :|.|.:...:::|........|. |.|...:||.. :::..|:|   |||.            .|
  Rat    46 VGGSEDVTVSLTPLQIKEGVLPVPTCGGLRNETGDWNLTVSPQANMLEVTVRWKRGLDWCSPDET 110

  Fly    70 PAITFPPRVQQKPKVAVASPTMSTALPLNSTEVNSTLSVSGD---------NTFYY----CSCDL 121
            .:.:..|.:.|...|:.:......|..|...|:....||:.:         |..|.    |.|||
  Rat   111 ASFSEAPCIVQTLLVSASHNASCLAHLLIQVEIYPNTSVTHNASENMTVIPNQVYQPLGPCPCDL 175

  Fly   122 QAGRCDLNCCCDNDCPLETRQVFN--CLP----NSLLPQLESRLEDFQYTHGLPTCQINDGW--- 177
            .|..||:.||||.||..|.|::|.  |..    ..:.|....|.. .:.||..|      .|   
  Rat   176 TAKACDIRCCCDQDCQPELRELFERFCFSGVFGGYVSPPSHHRCA-ARTTHQTP------DWFPF 233

  Fly   178 LCV------------FRSNTKATKTQPPDMNIDTSQYRKWKDNLEYQESDYAQSRP---SAGHYK 227
            |||            |.....:.:..|   ..:|..:...:|  .:.::.|.|..|   :.|::.
  Rat   234 LCVQSPPSTSPFLGHFYHGAISPRHSP---GFETHSHLDLRD--FFADASYKQGDPIMTTNGYFT 293

  Fly   228 F------GQTLQLWQPETKQLATLELPAAYESPNCQLKQSVWHLQPIRHVCRMKDSAQLQESIWS 286
            .      ||.||            :.|.|:             |:....||              
  Rat   294 IPQASLAGQCLQ------------DAPVAF-------------LRNFHSVC-------------- 319

  Fly   287 LLNQTSNYEILSK----PRDLEEPEVNGLIVQVCLRGANKSMRCLERGNDTQLD--------VIV 339
                |::.|:..:    |.|:......||:...........:..|....||.|.        .:.
  Rat   320 ----TTDLEVQERDRLIPEDMRIRTTGGLVTPTVTYEEATDLDKLITSPDTILSAGSAPRNVTVE 380

  Fly   340 DHVELQLIHNFTNILEAKLFLEEAKLAEDDNEPLWLRYNVEFVTLNESLTKPTSGPLGYLSGAPV 404
            :|...:..:|..:.|:..:.  .|::.......:..|:.|:|::.|....|..||..||..|.||
  Rat   381 EHYVFRWQNNSISSLDITII--RAEINAHQRGTMTQRFTVKFLSPNSGGEKEFSGNPGYQLGKPV 443

  Fly   405 ILSRMLPQNSSEDKQLISYHSLNQNIKEFH-WLSLPSRKPRGSSCQRALDHKEALR---FGIDLL 465
               |.|             |:...|:...| |      :|.|    |.|....|||   ||.|..
  Rat   444 ---RAL-------------HTDGMNVTTLHLW------QPAG----RGLCTSAALRPVLFGEDAS 482

  Fly   466 TRCELRHAAPLLQAHANHTEYCQGLQAQIWSLLLPHNCTQL-EDVTK-----VFVSHLGR----- 519
            :.|       ||:.         |::         .||||| |:|.:     :..:|:.|     
  Rat   483 SGC-------LLEV---------GIK---------ENCTQLRENVLQRLDLLIQATHVARRGNSD 522

  Fly   520 --PQPDKWLP-MEVRYPENVHEMPPPVQAVYDEMRQSLS-----CRNIFLSVGYEFHVAHLAMVE 576
              ...|.||. :.|..|:...::|             ||     |..:...|......|....||
  Rat   523 YGDLSDGWLEVIRVDAPDAGADLP-------------LSSANGMCPEVPTHVTIRILTAEAGAVE 574

  Fly   577 GRAPHQRVLQHARL--VLGQRH---DLEFDTSEIEVALPLSISAMF 617
            |.|..:.:....|.  |..|..   ..|.|.:::   ||||.|..|
  Rat   575 GEAQREILAVETRFSTVTWQYQCGLTCEEDKADL---LPLSASVKF 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tctnNP_608998.2 DUF1619 117..403 CDD:285068 67/327 (20%)
Tctn2NP_001074251.1 DUF1619 171..442 CDD:285068 67/327 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14611
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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