DRSC/TRiP Functional Genomics Resources

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Protein Alignment tctn and Tctn1

DIOPT Version :10

Sequence 1:NP_608998.2 Gene:tctn / 33866 FlyBaseID:FBgn0261697 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001388059.1 Gene:Tctn1 / 304486 RGDID:1566266 Length:635 Species:Rattus norvegicus


Alignment Length:628 Identity:132/628 - (21%)
Similarity:206/628 - (32%) Gaps:199/628 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPLVVLCLATYHTHSIKIGISHNYNATISPTASTT---------TEA-PATTGAPSSET-VSSIS 58
            ||.::|.|....|       |.:.....:|.|:|.         ||| |..|....:.| .:.:.
  Rat     6 LPPLLLVLLNCCT-------SSSTQVVATPAAATPVVTNEDLNFTEATPVVTNEDLNFTEATPVV 63

  Fly    59 TLPEAEVTTTTPAIT-----------------FPPRVQQKPKVAVASPTMSTALPLNSTEVNSTL 106
            |..:...|..||.:|                 :.||....|:    .|.:|...|...|:|.:  
  Rat    64 TNEDLNFTEATPVVTNEDLNFTEATPATLRPSWSPRTPGTPR----PPELSGPRPTPVTDVAA-- 122

  Fly   107 SVSGDNTFYYCSCDLQAGRCDLNCCCDNDCPLETRQVFN-------------CLPNSLL------ 152
                     .|.|||...:||:|||||.||......||:             |...:..      
  Rat   123 ---------LCVCDLLPAQCDINCCCDPDCSPGDFSVFSACSIPVVTGDRQFCSQKAAFYSMNLT 178

  Fly   153 ---PQLESRLEDFQYTHGLPTCQINDGWLCVFRSNTK-----ATKTQPPDMNIDTSQYRKWKDNL 209
               |..:.:|.|          |||....|:..||.|     |....|.:.|.|..........|
  Rat   179 ADPPHRDFKLID----------QINPSIFCIHISNYKPALSFANPEVPDENNFDRLMGASGGFTL 233

  Fly   210 EYQE---SDYAQSRPSAGHYKFGQTLQ-----------LWQPETKQLATLELPAAY---ESPNCQ 257
            ..:.   |......|....|::|..||           |..|.|..|...|.|||:   ::..|.
  Rat   234 SAESGVPSTATSDDPQPTKYEYGALLQTAGESSGSFLKLPSPLTSSLCADENPAAFLVNQAFECS 298

  Fly   258 LKQSVWHLQPIRHVCRMKDSAQLQESIWSLLNQTSNYEILSKPRDLEEP----EVNGLIVQVCLR 318
            .:.::             :..:..|::     ..::|   |.|..|..|    :|:..|..:..|
  Rat   299 RRVAI-------------EECERMEAL-----SMAHY---SSPAILRVPNSTTQVSIKIQSIMYR 342

  Fly   319 GANKSMRCLE-----------RGNDTQLDVIVDHVELQLIHNFT-NILEAKLFLEEAKLAEDDNE 371
            ..|.::..||           .|.|.....:|..|:..|::..: .|.||.|.|....|....: 
  Rat   343 SLNHTLTQLEGRGILRPSLVSTGQDRLCSNVVLQVKYSLLYTASGQIQEAGLSLVLGTLISTVS- 406

  Fly   372 PLWLRYNVEFVTLNESLTKPT--SGPLGYLSGAPVILSRMLPQNSSEDKQLISYHSLNQNIKEFH 434
            .|..::.:.|:   :..|||.  ||..||..|.| :.:...||..|         .:.|......
  Rat   407 LLQQKFEIHFI---QHGTKPVPLSGNPGYRVGLP-LAAGFQPQKGS---------GIIQTTNRQG 458

  Fly   435 WLSLPSRKPRGSSCQRALDHKEALRFGIDLLTRCELRHAAPLLQAHANHTEYCQGLQAQIWSLLL 499
            .|:: .|......|..:...:..:.||.::.:.|:||         ...|..| ||.||      
  Rat   459 QLTI-LRSTGKQDCLASHGQRAPVLFGYNVQSGCQLR---------LTGTIPC-GLLAQ------ 506

  Fly   500 PHNCTQLEDVTKVFVSHLGRPQPD--------------KWLPM 528
                 :::|:.:      |:..||              .|:|:
  Rat   507 -----KMQDLLR------GQAFPDYVAAFGNSRAQDVQDWVPV 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tctnNP_608998.2 Herpes_BLLF1 <33..>112 CDD:282904 22/106 (21%)
TCTN_DUF1619 117..403 CDD:462260 79/347 (23%)
Tctn1NP_001388059.1 TCTN_DUF1619 124..437 CDD:462260 79/347 (23%)

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