DRSC/TRiP Functional Genomics Resources

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Protein Alignment tctn and tctn-1

DIOPT Version :9

Sequence 1:NP_608998.2 Gene:tctn / 33866 FlyBaseID:FBgn0261697 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_500628.2 Gene:tctn-1 / 184035 WormBaseID:WBGene00017120 Length:470 Species:Caenorhabditis elegans


Alignment Length:545 Identity:99/545 - (18%)
Similarity:172/545 - (31%) Gaps:223/545 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 CPLETRQVFNCLPNSLLPQLESRLEDFQYTHGLPTCQINDGWLCVFRSNTKATKTQPPDMNIDTS 200
            |..:|.:|  |.|:.:..:::|.         .||.::    .||.:.|                
 Worm    27 CSADTPEV--CYPSVVRHRIDSI---------FPTSRL----FCVSKQN---------------- 60

  Fly   201 QYRKWKDNLEY----------QESDYAQSRPSAGHYKFGQTLQLW-QPETKQLATLELPAAYESP 254
                  |:|||          |.:::::||              | |.|:.....|||       
 Worm    61 ------DDLEYGDVEIVNGEEQWNEFSKSR--------------WQQDESDSQENLEL------- 98

  Fly   255 NCQLKQSVWHLQPIRHVCRMKDSAQLQESIWSLLNQTSNYEILSKPRDLEEPEVNGLIVQVCLRG 319
                    .|....|.|...|..|.:..|.:.    |....:::|                    
 Worm    99 --------LHFGSSRAVRLFKFPAAISASDFC----TGTQNVITK-------------------- 131

  Fly   320 ANKSMRCLERGNDTQLDVIVDHVELQLIHNFTNILEAKLFLEEAKLAE-DDNE------------ 371
            .|.:::|.......    |:.|.      :....|.|:.........| .:||            
 Worm   132 RNMTVKCKPLATTD----ILSHC------SENEFLNAQALFGNGDFVERTENETIAIPRLSTAQF 186

  Fly   372 --PLWLRYNVEFVTLNESLTKPTSGPLGYLSGAPVILSRM--LPQNSSE-DKQLISYHSLNQNIK 431
              |:|          |.|:.      .|.|..|.:|. ||  :..||.| |.|   |.||..|:.
 Worm   187 IAPVW----------NNSMC------YGVLKSANIIF-RMNGIKTNSVEIDAQ---YDSLPGNVD 231

  Fly   432 --------EFHWLSLPSRKPRGSSCQRALDHKEA-----------LRFGIDLLTRCELRHAAP-- 475
                    ..:|:.|.......:: |..:.:|..           :.|.:..|..|.....||  
 Worm   232 NNWFEQTFSVYWIPLVVASEIETN-QTVVGYKAGEQTYRVKGSIPVPFAVPTLGNCYSGSIAPSP 295

  Fly   476 --LLQAHAN----HTEYCQGLQAQ---IWSLLLPHNCTQLEDVTKVFVSHLGRPQPDKWLPMEVR 531
              .|::.::    .|..|:..:|:   .:..:.|          .|.||.          |.|..
 Worm   296 VFFLRSMSSVCTISTINCEDARAKARAFYEQVYP----------SVLVSS----------PSEDA 340

  Fly   532 YPENVHEMPPPVQAVYDEMRQS-LSCR---NIFLSVGYEFHVAHLAMVEGRAPHQR---VLQHAR 589
            :|.:|..    |...::|:..| :|||   :..|.:.|.        .:|...:.|   :..:::
 Worm   341 HPASVGR----VNVTWEELSPSTISCRLPVSSLLQIYYS--------KQGSTKNYREVIIAGNSQ 393

  Fly   590 LVLGQRHDLEFDTSEIEVALPLSIS 614
            |:|   .|:.:.:.: |:.:|:|||
 Worm   394 LLL---DDVPYLSGQ-EIRMPISIS 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tctnNP_608998.2 DUF1619 117..403 CDD:285068 47/292 (16%)
tctn-1NP_500628.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004997
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14611
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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