DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tctn and tctn1

DIOPT Version :9

Sequence 1:NP_608998.2 Gene:tctn / 33866 FlyBaseID:FBgn0261697 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_009303412.1 Gene:tctn1 / 100007222 ZFINID:ZDB-GENE-081104-157 Length:534 Species:Danio rerio


Alignment Length:667 Identity:124/667 - (18%)
Similarity:214/667 - (32%) Gaps:233/667 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TYHTHSIKI---GISH--NY-----NAT---ISPTASTTTEAPATTGAPSSETVSSISTLPEAEV 65
            |..|.:|.|   .::|  ||     |.|   :||||       |...||:..|...::.||:   
Zfish    22 TNTTQNINITLEDLNHTSNYRDEMLNITELGVSPTA-------ADLPAPTDRTPEYVTGLPD--- 76

  Fly    66 TTTTPAITFPPRVQQKPKVAVASPTMSTALPLNSTEVNSTLSVSGDNTFYYCSCDLQAGRCDLNC 130
                        :.:.||..:.....:||.|                                  
Zfish    77 ------------LNESPKSPIPDSPQATAAP---------------------------------- 95

  Fly   131 CCDNDCPLETRQVFNCLPNSLLPQLESRLEDFQYTHGLPTCQINDGWLCVFRSNTKATKTQPPDM 195
                            :|.|.:|.             :|..:..:|.       :.||...|.|.
Zfish    96 ----------------IPVSGVPP-------------VPVTEDEEGL-------SFATPEVPTDQ 124

  Fly   196 NIDTSQYRKWKDNLEYQESDYAQSRPSAGHYKFGQTLQLWQPETKQLATLELPAAYESPNCQLKQ 260
            |.|:...|.     ....:...:|.|.   |::|..:|....| .||.....||:..:.:|....
Zfish   125 NADSVFGRS-----NVSSATDVRSLPG---YRYGDIIQTVNKE-GQLEFFTFPASAGTAHCLDSN 180

  Fly   261 SVWHLQPIRHVC-RMKDSAQLQESIWSL-LNQTSNYEILSKPRDLEEPEVNGLIVQVCLRGANKS 323
            ....|:.....| |..|.|:...::.:| |....|:.|.|...  :..:|.|:.|      |..:
Zfish   181 PAGFLKEQTSRCMRSFDLARDCTTLGTLSLGNYLNFSIRSGKN--QGAKVIGVEV------AAIT 237

  Fly   324 MRCLERGNDTQLDV---------------------IVDHVELQLIHN----FTNILEAKLFLEEA 363
            ::.||   .||:.|                     :|..|:...::|    ..|::.|  ||..|
Zfish   238 LQSLE---GTQMPVDPADSSSYFPMLLQSGDVCSNVVQQVKYAFVYNKAGEILNVMAA--FLLGA 297

  Fly   364 KLAEDDNEPLWLRYNVEFVTLNESLT-KPTSGPLGYLSGAPVILSRMLPQNSSEDKQLISYHSLN 427
              .::...|:...:.:.|:..|...| ...||..||:.|.|                |::.....
Zfish   298 --IKNVMVPIQQEFQIMFLQENSQTTGLKYSGNPGYVLGRP----------------LVAGTRTA 344

  Fly   428 QNIKEFHWLSLPSRKPRGS----------SCQRALDHKEALRFGIDLLTRCELRHAAPLLQAHAN 482
            ..|.:|       ..|:||          .|.|....:..:.|||:.::.|.|:           
Zfish   345 NGIVQF-------ADPKGSLTTIQTSVDQDCLRGSSRRSPVLFGINTISGCTLK----------- 391

  Fly   483 HTEYCQGLQAQIWSLLLPHNCTQLEDVTKVFVSHLGRPQPDKWLPMEVRYPENVHEMPPPVQAVY 547
               ...|:           ||:|:.:|  :..:..|:..||.........|:|..:. .|:|   
Zfish   392 ---LSDGV-----------NCSQVSEV--ILWALKGQSFPDHVASFGNSLPQNSLDW-VPIQ--- 436

  Fly   548 DEMRQSLSCRNIFLSVGYEFHV-----AHLAMVEGRAPHQRVLQHARLVLGQRHDLEFDTSEIEV 607
               .|::|......|:...:|:     .:.|::.   |..:::.....::.....|.|.||...:
Zfish   437 ---NQTISLGAQACSIPLSYHLEVKWTKYGALLN---PQAQIVSIMETIITNTSSLAFITSPGGL 495

  Fly   608 ALPLSISAMFYRMQTKA 624
             ||::.|..|..:...|
Zfish   496 -LPVTSSVSFVDVSASA 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tctnNP_608998.2 DUF1619 117..403 CDD:285068 59/313 (19%)
tctn1XP_009303412.1 DUF1619 <110..336 CDD:285068 55/256 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004997
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14611
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4647
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.010

Return to query results.
Submit another query.