DRSC/TRiP Functional Genomics Resources

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Protein Alignment WDR79 and AT4G21520

DIOPT Version :9

Sequence 1:NP_001285665.1 Gene:WDR79 / 33865 FlyBaseID:FBgn0031782 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_193883.2 Gene:AT4G21520 / 828237 AraportID:AT4G21520 Length:425 Species:Arabidopsis thaliana


Alignment Length:367 Identity:118/367 - (32%)
Similarity:183/367 - (49%) Gaps:36/367 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 HYTKGCYWSPDGTCLLVPVHLDGMHVIEMPSDLYSADT---VQPARSLTKLQSEVHVPEGGTVYD 244
            ::.||..|||||:|.|.....:.:.:..:|.|  ..|:   ..|........:.:.|.||.:|||
plant    52 NFLKGLKWSPDGSCFLASSEDNTLSLFHLPQD--GGDSNGYGVPVPEEDSYGASLLVNEGESVYD 114

  Fly   245 CVWYPHMNSLQPETCLWLATRQHEPIHMWDAFDGSLRCSYSGYDAVDEVMAAISLAFSHDGEQIY 309
            ..|||:|:...|.||::..:.:..|||:||:..|.|||:|..|||:||:.||.|:.|:.||.:|:
plant   115 FCWYPYMSVSDPLTCVFATSTRDHPIHLWDSTSGELRCTYRAYDAMDEITAAFSVGFNPDGTKIF 179

  Fly   310 AGYKRCIKIFDTSRPGRFCDDYPV--------KFAISCIAQTTAHPHTLTCGNWHGYIQHFDLRC 366
            |||...|::||..||||....|..        ...:|.:|.:..:...|..|:   |.|...:..
plant   180 AGYNSSIRVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGS---YGQTTGIYR 241

  Fly   367 SHKQGPLFTLGGHKGGITQLRYGEFGNGEWHLFSGARKCDKILQWDMRNYKQPLVELQRHVD-TN 430
            ......|:.|.|.:||:|.:::.:.||   :|::|.||...||.||:|...:.:.:|.|..: ||
plant   242 EDNMELLYVLHGQEGGVTHVQFSKDGN---YLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTN 303

  Fly   431 QRIQFDLASDSNWLASGDTRGFVNVWDLKKYGDPSVLPLHSDCCNGVALNPAMPILATSSGQFHF 495
            ||:.||:......|.:|...|.|:::||:.....|.....||..|..:.:|.:|:.|||||...|
plant   304 QRVFFDIEPCGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNAFSFHPYLPMAATSSGHRRF 368

  Fly   496 TDQSAQGDNVTLNGTETTELPAPADVNQNQKEVLYENAVVMW 537
               :...|:   :|.:..||...||          ||.|.:|
plant   369 ---AIPDDD---DGEDKNELQLKAD----------ENCVSLW 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDR79NP_001285665.1 WD40 <273..490 CDD:330360 75/225 (33%)
WD40 repeat 294..332 CDD:293791 17/37 (46%)
WD40 repeat 337..377 CDD:293791 7/39 (18%)
WD40 repeat 384..424 CDD:293791 12/39 (31%)
WD40 repeat 433..466 CDD:293791 8/32 (25%)
AT4G21520NP_193883.2 WD40 <45..363 CDD:225201 104/318 (33%)
WD40 repeat 57..96 CDD:293791 11/40 (28%)
WD40 repeat 113..158 CDD:293791 19/44 (43%)
WD40 repeat 163..209 CDD:293791 18/45 (40%)
WD40 repeat 216..252 CDD:293791 7/38 (18%)
WD40 repeat 258..299 CDD:293791 14/43 (33%)
WD40 repeat 347..379 CDD:293791 11/37 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2919
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9995
Inparanoid 1 1.050 183 1.000 Inparanoid score I1435
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D934297at2759
OrthoFinder 1 1.000 - - FOG0005823
OrthoInspector 1 1.000 - - oto3490
orthoMCL 1 0.900 - - OOG6_102801
Panther 1 1.100 - - LDO PTHR13211
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4799
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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