DRSC/TRiP Functional Genomics Resources

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Protein Alignment WDR79 and gnr1

DIOPT Version :9

Sequence 1:NP_001285665.1 Gene:WDR79 / 33865 FlyBaseID:FBgn0031782 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_587950.1 Gene:gnr1 / 2539303 PomBaseID:SPCC1020.09 Length:399 Species:Schizosaccharomyces pombe


Alignment Length:326 Identity:90/326 - (27%)
Similarity:140/326 - (42%) Gaps:34/326 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 SSTEAQHYTKGCYWSPDGTCLLVPVHLDGMHVIEMP-SDLYSADTVQPARSLTKLQSEVHVPEGG 240
            |.|:..::.....|||||:.:|.......::...:| ||| |.....|......|..:...||  
pombe    41 SPTKPLNFFHSSRWSPDGSTILSLTEDQCLNCWNVPFSDL-SKKADGPLNFSKHLSYKYQSPE-- 102

  Fly   241 TVYDCVWYPHMNSLQPETCLWLATRQHEPIHMWDAFDGSLRCSYSGYDAVDEVMAAISLAFSHDG 305
            |||...||..|....|.:.|:..:.:.:||.:.:...|..:.||...|..:....:..|.|::||
pombe   103 TVYSYSWYSRMKLDDPSSNLFAVSSRDQPIKLINFTTGKNKASYHMIDHQERYQGSHCLQFTNDG 167

  Fly   306 EQIYAGYKRCIKIFDTSRPGRFCD----------------DYPVKFAISCIAQTTAHPHTLTCGN 354
            |.:.||.|.|:..|:. |.|  |.                ::.:|...||.:.......||..|.
pombe   168 EYLIAGDKNCLHHFNI-RTG--CKEPVMTTVTHGYKVPLWEFSLKGIQSCFSLNPMDSKTLAVGT 229

  Fly   355 WHGYIQHFDLRCSHKQGPL-FTLGGHKG-GITQLRYGEFGNGEWHLFSGARKCDKILQWDMRNYK 417
            :...:..:: .|..:...| |::  .:| |:|.|::.|.|.   .|:.|:|..|||..||:|..:
pombe   230 YSNRVGIYN-DCGRRPCQLEFSI--ERGNGVTHLQWCEDGE---KLYVGSRCSDKIEVWDIRYVR 288

  Fly   418 QPLVELQRH-VDTNQRIQFDLASDSNWLASGDTRGFVNVWDLKKYGDPSVLPLHSD-CCNGVALN 480
            ..:..|:.| .||||||.||.......||.| |.|.:..|..|...:.:.:..:.| ..|.|..|
pombe   289 DMVYALEGHRGDTNQRILFDTDKKDEILAGG-TDGSIRRWRNKDLVEETHVTGNYDLTVNTVQAN 352

  Fly   481 P 481
            |
pombe   353 P 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDR79NP_001285665.1 WD40 <273..490 CDD:330360 63/229 (28%)
WD40 repeat 294..332 CDD:293791 13/53 (25%)
WD40 repeat 337..377 CDD:293791 8/40 (20%)
WD40 repeat 384..424 CDD:293791 13/39 (33%)
WD40 repeat 433..466 CDD:293791 10/32 (31%)
gnr1NP_587950.1 WD40 47..>369 CDD:225201 88/320 (28%)
WD40 53..328 CDD:295369 81/287 (28%)
WD40 repeat 54..98 CDD:293791 13/44 (30%)
WD40 repeat 105..150 CDD:293791 11/44 (25%)
WD40 repeat 157..193 CDD:293791 13/38 (34%)
WD40 repeat 212..250 CDD:293791 7/38 (18%)
WD40 repeat 257..295 CDD:293791 13/40 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2193
eggNOG 1 0.900 - - E1_KOG2919
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 85 1.000 Inparanoid score I1795
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005823
OrthoInspector 1 1.000 - - oto100529
orthoMCL 1 0.900 - - OOG6_102801
Panther 1 1.100 - - LDO PTHR13211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4109
SonicParanoid 1 1.000 - - X4799
TreeFam 00.000 Not matched by this tool.
1110.890

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