DRSC/TRiP Functional Genomics Resources

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Protein Alignment WDR79 and tcab-1

DIOPT Version :9

Sequence 1:NP_001285665.1 Gene:WDR79 / 33865 FlyBaseID:FBgn0031782 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001367010.1 Gene:tcab-1 / 173303 WormBaseID:WBGene00013669 Length:449 Species:Caenorhabditis elegans


Alignment Length:488 Identity:110/488 - (22%)
Similarity:177/488 - (36%) Gaps:127/488 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ASMLNHNVSFSSTMVTSNGDLSLPKLSVTLSA--EEI-LKLRSGRPKNAVESPHAGVPMETSLAA 116
            ||:|:   |..|..:.|..|    :||.|.:|  ||| .::...||.|..|........|.....
 Worm    27 ASLLS---SLRSDHLASKID----ELSTTEAAASEEIPEEIPENRPLNRKEKRKLQRMQEIDQEV 84

  Fly   117 EEEANGDEEEESVRVVDIEDTLELTSNGNEAKPEDQELAIAPVLQYFQGALVELGRRCWTSSTEA 181
            :::|     :|.|.:.:|...|:.|......               |.....:.|.:    |||.
 Worm    85 KKKA-----QEPVEIAEIPTNLKNTFCDKAT---------------FNSYNAQFGYK----STEN 125

  Fly   182 QHYTKGCYWSPDGTCLLVPVHLDGMHVIEMPSDLYSADTVQPARSLTKLQSEV-------HVPEG 239
            .::                ||             :|....|..|:|...|...       ..|| 
 Worm   126 NNF----------------VH-------------FSIQNEQGNRALVASQDRFIRMYKIDETPE- 160

  Fly   240 GTVYDCVWYPHMNSLQPETCLW-------LATRQHEPIHMWDAFDGSLRCSYSGYDAVDEVMAAI 297
                 .:|..:..:|..::| |       .::.:..||.::|..:||:..:|:|.||.|.:.||:
 Worm   161 -----VIWKHNTGNLVLDSC-WENSGKGVFSSSKLRPIQLFDTENGSILGAYNGKDAGDNITAAM 219

  Fly   298 SLAFSHDGEQIYAGYKRCIKIFDTSRPG-------RFCDDYPVKFAISCIAQTTAHPHTLT---- 351
            |:..|  |..:..|:|...:|:|....|       .|.:||.        ..||..|.::|    
 Worm   220 SIGQS--GSSLIGGFKNKFQIWDIEYTGDAIQHIKSFDNDYN--------TGTTGLPMSITPHPT 274

  Fly   352 ------CGNWHGYIQHFDLRCSHKQGPLFTLGGHKGGITQLRYGEFGNGEWHLFSGARKCDKILQ 410
                  .|.....:..:.|:.   :..:.|:.|...|.|.|.:...|   ..|::..||.| |..
 Worm   275 MPDLFAAGGSSSLVAIYSLKW---RNAVSTIEGSLKGYTNLHFSPDG---LKLYASERKGD-IHC 332

  Fly   411 WDMRNYKQPLVELQRHVDTNQRIQFDLASDSNWLASGDTRGFVNVWDLKKYGDPSVLPLH----- 470
            :|.|......: |:|.:....|.:|.:......|.||.:.|.|.|:||.:|.: .:.|.|     
 Worm   333 FDTRMNMLTQI-LKRDMTATHRTRFSIDKSGRLLFSGTSGGDVIVYDLHEYSE-ELQPAHVQNVA 395

  Fly   471 SDCCNGVALNPAMPILATSSGQFHFTDQSAQGD 503
            |.|...|.|.....:|.  ||:..:.|....||
 Worm   396 SRCVPCVDLKGKKLVLC--SGERVYPDDKLLGD 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDR79NP_001285665.1 WD40 <273..490 CDD:330360 60/238 (25%)
WD40 repeat 294..332 CDD:293791 12/44 (27%)
WD40 repeat 337..377 CDD:293791 7/49 (14%)
WD40 repeat 384..424 CDD:293791 10/39 (26%)
WD40 repeat 433..466 CDD:293791 10/32 (31%)
tcab-1NP_001367010.1 WD40 <137..378 CDD:421866 62/265 (23%)
WD40 repeat 172..208 CDD:293791 8/36 (22%)
WD40 repeat 213..259 CDD:293791 13/47 (28%)
WD40 repeat 267..303 CDD:293791 4/38 (11%)
WD40 repeat 310..345 CDD:293791 10/39 (26%)
WD40 repeat 353..379 CDD:293791 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158760
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2919
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005823
OrthoInspector 1 1.000 - - oto20512
orthoMCL 1 0.900 - - OOG6_102801
Panther 1 1.100 - - LDO PTHR13211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4109
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.730

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