DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arpc4 and arc4

DIOPT Version :10

Sequence 1:NP_608996.1 Gene:Arpc4 / 33864 FlyBaseID:FBgn0284255 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_594116.1 Gene:arc4 / 2541767 PomBaseID:SPAC6G9.07C Length:168 Species:Schizosaccharomyces pombe


Alignment Length:168 Identity:109/168 - (64%)
Similarity:138/168 - (82%) Gaps:0/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREKVLIEP 65
            |:.||:|||.|||.:|||::.|::|.|::|||.::||||:..|.|::|.|:||||||:|:.|||.
pombe     1 MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQCLIES 65

  Fly    66 SINSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITNFHTEQMYKHK 130
            |:||||.||.:||.|||||||..||.:|:|.|||||.||||||::||||||||||:|||:|.|||
pombe    66 SVNSVRFSIRIKQVDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITNYHTEEMLKHK 130

  Fly   131 LVDFVISFMEEIDKEISEMKLAVNARARTCAEEFLKRF 168
            ||||:|.||||:|.|||||||.:|.|||..||.:|..|
pombe   131 LVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arpc4NP_608996.1 ARPC4 1..166 CDD:461760 107/164 (65%)
arc4NP_594116.1 ARPC4 1..166 CDD:461760 107/164 (65%)

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