DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arpc4 and ARPC4

DIOPT Version :9

Sequence 1:NP_608996.1 Gene:Arpc4 / 33864 FlyBaseID:FBgn0284255 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001185709.1 Gene:ARPC4 / 10093 HGNCID:707 Length:187 Species:Homo sapiens


Alignment Length:166 Identity:138/166 - (83%)
Similarity:152/166 - (91%) Gaps:0/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREKVLIEPSI 67
            |||:|||:|||.:|.||:||::|.|||||||||||||:.|||||:|.||.:||||:||||||.||
Human    22 ATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSI 86

  Fly    68 NSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITNFHTEQMYKHKLV 132
            ||||||||||||||||:||||||.||||.|||:|.||||||:|||||||||||||||||||||||
Human    87 NSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLV 151

  Fly   133 DFVISFMEEIDKEISEMKLAVNARARTCAEEFLKRF 168
            ||||.||||||||||||||:||||||..||||||.|
Human   152 DFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arpc4NP_608996.1 ARPC4 1..166 CDD:399097 135/162 (83%)
ARPC4NP_001185709.1 ARPC4 21..185 CDD:368638 135/162 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159040
Domainoid 1 1.000 272 1.000 Domainoid score I1807
eggNOG 1 0.900 - - E1_KOG1876
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4177
Inparanoid 1 1.050 274 1.000 Inparanoid score I2985
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53638
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003327
OrthoInspector 1 1.000 - - oto90226
orthoMCL 1 0.900 - - OOG6_102934
Panther 1 1.100 - - LDO PTHR22629
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R90
SonicParanoid 1 1.000 - - X2219
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.790

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