DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stai and stmn3

DIOPT Version :9

Sequence 1:NP_001245912.1 Gene:stai / 33863 FlyBaseID:FBgn0266521 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_001339376.4 Gene:stmn3 / 798970 ZFINID:ZDB-GENE-081124-2 Length:181 Species:Danio rerio


Alignment Length:175 Identity:49/175 - (28%)
Similarity:91/175 - (52%) Gaps:29/175 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SALTVMLERMRQEDLENRIAT-----------------EIRCQEKSRGGLSYEVILAEPA-PNVA 161
            |.|:...:::|:..:.:.|.:                 |::...|...|.::||||..|. |:  
Zfish     3 STLSAYSDKLREMSVLSLICSCLYNQPHPNTFGQFEDMEVKSLNKRASGQAFEVILKSPTDPS-- 65

  Fly   162 VPKRPVT-----PGKNVSVEEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEF 221
             |:||.|     ..|..|:.|::::|:|||.||.|.|.:.:..::.|..:.:|...|..|:.|.:
Zfish    66 -PERPQTLALPPQRKEPSLGELQRRLEAAEARRRSQEKQVLKQLAEKREREKEVLTKAQEVNNNY 129

  Fly   222 ITQTKEQLESKMELHVEKREAIISDMKEKLK---IHAQDIEKTRE 263
            ..:|:|:|..|||:..|.|.|.::.:|::|:   |||:::.|.:|
Zfish   130 SKKTEEKLNHKMEMITENRMARLNALKQRLREKEIHAEEVRKNKE 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staiNP_001245912.1 Stathmin 138..267 CDD:279209 44/135 (33%)
beta_CA <242..313 CDD:294276 8/25 (32%)
stmn3XP_001339376.4 Stathmin 43..175 CDD:279209 44/135 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595182
Domainoid 1 1.000 79 1.000 Domainoid score I8582
eggNOG 1 0.900 - - E1_KOG1280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000827
OrthoInspector 1 1.000 - - otm25010
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10104
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5280
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.870

Return to query results.
Submit another query.