DRSC/TRiP Functional Genomics Resources

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Protein Alignment stai and Stmn4

DIOPT Version :9

Sequence 1:NP_001245912.1 Gene:stai / 33863 FlyBaseID:FBgn0266521 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001297451.1 Gene:Stmn4 / 56471 MGIID:1931224 Length:216 Species:Mus musculus


Alignment Length:160 Identity:57/160 - (35%)
Similarity:88/160 - (55%) Gaps:19/160 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 ERMRQE---DLENRIATEIRCQE--KSRGGLSYEVILAEPA----P--NVAVPKRPVTPGKNVSV 175
            ||..|.   ||...:.:::...|  |...|.|:||||..|:    |  |.::|:|     ::.|:
Mouse    59 ERREQADTVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRR-----RDPSL 118

  Fly   176 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKR 240
            |||::||:||||||...||:.:..::.|.....|..:|..|..|.||...||:|..|||.:.|.|
Mouse   119 EEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENR 183

  Fly   241 EAIISDMKEKLK---IHAQDIEKTRETLEQ 267
            ||.::.|.|:|:   .||:::.|.:|..|:
Mouse   184 EAHLAAMLERLQEKDKHAEEVRKNKELKEE 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staiNP_001245912.1 Stathmin 138..267 CDD:279209 51/139 (37%)
beta_CA <242..313 CDD:294276 9/29 (31%)
Stmn4NP_001297451.1 Stathmin 76..211 CDD:395674 51/139 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849488
Domainoid 1 1.000 76 1.000 Domainoid score I8915
eggNOG 1 0.900 - - E1_KOG1280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000827
OrthoInspector 1 1.000 - - otm44265
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10104
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5280
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.830

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