DRSC/TRiP Functional Genomics Resources

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Protein Alignment stai and stmn4l

DIOPT Version :9

Sequence 1:NP_001245912.1 Gene:stai / 33863 FlyBaseID:FBgn0266521 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001002563.1 Gene:stmn4l / 436836 ZFINID:ZDB-GENE-040718-301 Length:188 Species:Danio rerio


Alignment Length:145 Identity:51/145 - (35%)
Similarity:81/145 - (55%) Gaps:6/145 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 DLENRIATEIRCQE--KSRGGLSYEVILAEPAPNVAVPKRPV-TPGKNVSVEEIEQKLKAAEERR 189
            ||...|..::...|  |...|.::||||..|:.:......|. .|.::.|:|||::||.||||||
Zfish    40 DLNLGIIKDMEVIELNKRSSGQAFEVILRPPSFDGQREFHPTFPPRRDPSLEEIQKKLDAAEERR 104

  Fly   190 ISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLK-- 252
            ...||:.:..::.|.....|..:|..|..|.|:...||:||.:||::.|.|||.|:.|.|:|:  
Zfish   105 KCQEAELLKHLAEKREHEREVAQKALEEHNNFMKMAKEKLEHRMEINKENREAHIAAMLERLQEK 169

  Fly   253 -IHAQDIEKTRETLE 266
             .||:::.|.:|.::
Zfish   170 DKHAEEVRKHKELMD 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staiNP_001245912.1 Stathmin 138..267 CDD:279209 48/135 (36%)
beta_CA <242..313 CDD:294276 9/28 (32%)
stmn4lNP_001002563.1 Stathmin 52..182 CDD:279209 47/129 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595183
Domainoid 1 1.000 79 1.000 Domainoid score I8582
eggNOG 1 0.900 - - E1_KOG1280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000827
OrthoInspector 1 1.000 - - otm25010
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10104
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17327
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.830

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