DRSC/TRiP Functional Genomics Resources

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Protein Alignment stai and stmnd1

DIOPT Version :9

Sequence 1:NP_001245912.1 Gene:stai / 33863 FlyBaseID:FBgn0266521 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_002665640.3 Gene:stmnd1 / 100331092 ZFINID:ZDB-GENE-130201-3 Length:261 Species:Danio rerio


Alignment Length:185 Identity:45/185 - (24%)
Similarity:76/185 - (41%) Gaps:44/185 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SEMHSNPADASALTVMLERMRQEDLENRIATEIR---CQEKSRG-----------GLSYEVILAE 155
            ::..:|....|:...::|.::..:|.......::   .|..|||           |:|.:...|.
Zfish    19 NQRETNMGCGSSRITVVEPVKTSNLNGNETDTLQFDVAQGGSRGDSAISKMTIDSGVSLDAAEAA 83

  Fly   156 PAPNVAVPK-----RPVTPG----KNVSVEEIEQKL------------KAAEERRISLEAKKMAD 199
            ..|. .||:     :..|||    :..|.|.:||.|            ::.:...|.::....|.
Zfish    84 GLPG-TVPRLLPQLQAQTPGHSEERPESSEILEQLLAQGIIPAQPKHGESGQSYNIMMDDTGKAR 147

  Fly   200 ISTKLAKVEE-ATRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKI 253
             |...|::|. .|||:.|||.      ||.:|.||.|..|:|:....|:|.:|:|
Zfish   148 -SRPPARLESLKTRKEQEITK------KEDIEMKMRLVEERRKEREEDLKRRLRI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staiNP_001245912.1 Stathmin 138..267 CDD:279209 41/152 (27%)
beta_CA <242..313 CDD:294276 4/12 (33%)
stmnd1XP_002665640.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595181
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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