DRSC/TRiP Functional Genomics Resources

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Protein Alignment stai and stmn2b

DIOPT Version :9

Sequence 1:NP_001245912.1 Gene:stai / 33863 FlyBaseID:FBgn0266521 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001019393.1 Gene:stmn2b / 100003563 ZFINID:ZDB-GENE-050522-207 Length:180 Species:Danio rerio


Alignment Length:176 Identity:48/176 - (27%)
Similarity:87/176 - (49%) Gaps:32/176 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 ERMRQEDLENRIAT-----------------EIRCQEKSRGGLSYEVILAEPAPN-------VAV 162
            |:|::..|.:.|.:                 |::...|...|.::||||..|:|.       .:.
Zfish    10 EKMKELSLVSLICSCLYPEARKNIMGEFEDMEVKAINKRASGQAFEVILKPPSPTTEGGYSITSP 74

  Fly   163 PKRPVTPGKNVSVEEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKE 227
            ||:     :::|:|:|::||:|||:||.|.||:.:..::.|.....:...|..|..:.|....:|
Zfish    75 PKK-----RDMSLEDIQKKLEAAEDRRRSQEAQVLKALAEKREHERDVLLKAMEENSNFSRMAEE 134

  Fly   228 QLESKMELHVEKREAIISDMKEKL---KIHAQDIEKTRETLEQQKA 270
            :|..|||...|.|:|.::.|.::|   :.|||.:.:.:|..|:..|
Zfish   135 KLILKMEQIKENRDAHLAAMMDRLHEKEKHAQLVRRNKELREELTA 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
staiNP_001245912.1 Stathmin 138..267 CDD:279209 41/138 (30%)
beta_CA <242..313 CDD:294276 9/32 (28%)
stmn2bNP_001019393.1 Stathmin 43..174 CDD:279209 40/135 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595180
Domainoid 1 1.000 79 1.000 Domainoid score I8582
eggNOG 1 0.900 - - E1_KOG1280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000827
OrthoInspector 1 1.000 - - otm25010
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10104
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.800

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