DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9175 and SEC12

DIOPT Version :9

Sequence 1:NP_608995.2 Gene:CG9175 / 33862 FlyBaseID:FBgn0031779 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_014423.1 Gene:SEC12 / 855760 SGDID:S000005309 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:473 Identity:84/473 - (17%)
Similarity:148/473 - (31%) Gaps:158/473 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VNFPLYAVDMLTSRHILVAGGGGSSKTGVANGFEIY----------ELYHNGSHFCAEEVLRHET 69
            |.:|.|....|.:..:|||||||....|:.|...:.          |.:|..|.|..|:.....|
Yeast    10 VGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPT 74

  Fly    70 GANVVMNFAVRNGGRRGYLCAGQEAHCQMYYVQPRVQSEEDGNGNGVGVGDGKPAPEERPHENGN 134
            ..:          ..:|.:..|    |               |.|...:..||            
Yeast    75 AID----------ASKGIILVG----C---------------NENSTKITQGK------------ 98

  Fly   135 VRQRNAHSGVEPVANGHRPPLSTADILRQFR--RLHFDIQAADVIQTDFLKGAEPLQRVVRISGN 197
                         .|.|         ||:|:  :::..::....:..|....|:...::|.||..
Yeast    99 -------------GNKH---------LRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 141

  Fly   198 GRL--MATGGTDGKLRVWTFPQMTLAAELAAHSKEIDDLDFSPDSKLIASISKDAQGLVWDLASG 260
            |.:  :|:......:|:.....:|...|:.... |:.||.||.|.|::|.|:..:..::..:...
Yeast   142 GTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG-EVKDLHFSTDGKVVAYITGSSLEVISTVTGS 205

  Fly   261 QLQHKLQWKTPEGAKYLFKRCRYGTVEAQKDNYRLFTIANPLGK--------------------- 304
            .:..|..:.         |......:....|:..|...:...||                     
Yeast   206 CIARKTDFD---------KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ 261

  Fly   305 -VGKQRGFLQHWDCASGQLRQAVAIDESLSSLAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHI 368
             ..:.:|.........|:|....:.|.|::.:.::|                    .|:.::  .
Yeast   262 VTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD--------------------LSMSKI--F 304

  Fly   369 PHAHSMFVTGLQFLPITNEEGPPISSDTEAAVLSISVDNKVCIHSL--------SQRRTIPAWIA 425
            ..|||..:|.:           .||.|: ..|.|:|..|.:.|..|        |.::.|..:..
Yeast   305 KQAHSFAITEV-----------TISPDS-TYVASVSAANTIHIIKLPLNYANYTSMKQKISKFFT 357

  Fly   426 IVFLIVMIFAVFVLCSYI 443
            ...|||::       |||
Yeast   358 NFILIVLL-------SYI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9175NP_608995.2 WD40 <190..>421 CDD:225201 44/262 (17%)
WD40 190..>420 CDD:295369 44/261 (17%)
WD40 repeat 190..226 CDD:293791 8/37 (22%)
WD40 repeat 231..267 CDD:293791 9/35 (26%)
WD40 repeat 296..327 CDD:293791 5/52 (10%)
SEC12NP_014423.1 WD40 79..>335 CDD:225201 55/352 (16%)
WD40 repeat 177..212 CDD:293791 9/34 (26%)
WD40 repeat 219..258 CDD:293791 4/38 (11%)
WD40 repeat 270..305 CDD:293791 6/56 (11%)
WD40 repeat 312..360 CDD:293791 12/59 (20%)
WD40 repeat 368..431 CDD:293791 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0771
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23284
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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