DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9175 and Preb

DIOPT Version :10

Sequence 1:NP_608995.2 Gene:CG9175 / 33862 FlyBaseID:FBgn0031779 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001164179.1 Gene:Preb / 58842 RGDID:61929 Length:417 Species:Rattus norvegicus


Alignment Length:438 Identity:140/438 - (31%)
Similarity:214/438 - (48%) Gaps:48/438 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LARVNFPLYA--VDMLTSRHILVAGGGGSSKTGVANGFEIYELYHNGSHFCAEEVLRHETGANVV 74
            |.|..|||||  :|..|.. ::.|||||::|||:.||....:|........|..:..|:|.....
  Rat     9 LYRAPFPLYALRIDPKTGL-LIAAGGGGAAKTGIKNGVHFLQLEQISGCLSASLLHSHDTETRAT 72

  Fly    75 MNFAVRNGGRRGYLCAGQEAHCQMYYVQPRVQSEEDGNGNGVGVGDGKPAPEERPHENGNVRQRN 139
            ||.|:..    ..|.|||:|.||:...|...|.......:|        :.|:.|.:........
  Rat    73 MNLALAG----DILAAGQDAQCQLLRFQIHQQKGSKAEKSG--------SKEQGPRQRKGAAPAE 125

  Fly   140 AHSGVEPVANGHRPPLSTADILRQFRRLHFDIQAADVIQTDFLKGAEPLQRVVRISGNGRLMATG 204
            ..||.|....|                :...::..:.:||||  ..||||:||..:.:..|:|||
  Rat   126 KKSGAEVHPEG----------------VELKVKNLEAVQTDF--STEPLQKVVCFNHDNTLLATG 172

  Fly   205 GTDGKLRVWTFPQMTLAAELAAHSKEIDDLDFSPDSKLIASISKDAQGLVWDLASGQLQHKLQWK 269
            |:||.:|||..|.:....|..||..||.||...||.||: ::..|.:..||.  ..||..:|||:
  Rat   173 GSDGHVRVWKVPSLEKVLEFKAHEGEIGDLALGPDGKLV-TVGWDFKASVWQ--KDQLVTQLQWQ 234

  Fly   270 ----TPEGAKYLFKRCRYGTVEAQKDNYRLFTIANPLGKVGKQRG-FLQHWDCASG-QLRQAVAI 328
                |.....|.::.||:|.|..|....||||:..|..::.:... :|..||.::. .|:.....
  Rat   235 ENGPTSSNTPYRYQACRFGQVPDQPGGLRLFTVQIPHKRLRQPPPCYLTAWDSSTFLPLQTRSCG 299

  Fly   329 DESLSSLAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLPITNEE--GPP 391
            .|.:|.|.|.:.|.|:.:||: :|||::||||||||:.::..||.:.||.:.|||   |:  ||.
  Rat   300 HEVISCLTVSESGTFLGLGTV-TGSVAIYIAFSLQRLYYVKEAHGIVVTDVTFLP---EKGCGPK 360

  Fly   392 ISSDTEAAVLSISVDNKVCIHSLSQRRTIPAWIAIVFLIVMIFAVFVL 439
            :....|.|:.|::||::..:|.|..||::|.|:.::..:.:|....:|
  Rat   361 LLGPHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9175NP_608995.2 WD40 <169..383 CDD:441893 80/219 (37%)
WD40 repeat 190..226 CDD:293791 14/35 (40%)
WD40 repeat 231..267 CDD:293791 12/35 (34%)
WD40 repeat 296..327 CDD:293791 7/32 (22%)
PrebNP_001164179.1 WD40 repeat 16..67 CDD:293791 18/51 (35%)
WD40 repeat 73..109 CDD:293791 12/39 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..135 6/41 (15%)
WD 1 152..191 17/38 (45%)
WD40 repeat 153..193 CDD:293791 18/39 (46%)
WD40 <160..353 CDD:441893 71/196 (36%)
WD 2 194..232 15/40 (38%)
WD 3 298..337 19/39 (49%)

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