DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9175 and Preb

DIOPT Version :9

Sequence 1:NP_608995.2 Gene:CG9175 / 33862 FlyBaseID:FBgn0031779 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_057912.2 Gene:Preb / 50907 MGIID:1355326 Length:417 Species:Mus musculus


Alignment Length:442 Identity:143/442 - (32%)
Similarity:216/442 - (48%) Gaps:56/442 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LARVNFPLYA--VDMLTSRHILVAGGGGSSKTGVANGFEIYELYHNGSHFCAEEVLRHETGANVV 74
            |.|..|||||  :|..|.. ::.|||||::|||:.||....:|........|..:..|:|.....
Mouse     9 LYRAPFPLYALRIDPKTGL-LIAAGGGGAAKTGIKNGVHFLQLELINGCLSASLLHSHDTETRAT 72

  Fly    75 MNFAVRNGGRRGYLCAGQEAHCQMYYVQPRVQSEEDGNGNGVGVGDGKPAPEERPHENGNVRQRN 139
            ||.|:..    ..|.|||:|.||:...|...|.......:|        :.|:.|.:........
Mouse    73 MNLALAG----DILAAGQDAQCQLLRFQVHQQKGSKAEKSG--------SKEQGPRQRKGAPPAE 125

  Fly   140 AHSGVEPVANGHRPPLSTADILRQFRRLHFDIQAADVIQTDFLKGAEPLQRVVRISGNGRLMATG 204
            ..||.:....|                :...::..:.:||||  ..||||:||..:.:..|:|||
Mouse   126 KKSGAQVHPEG----------------VELKVKNLEAVQTDF--SNEPLQKVVCFNHDNTLLATG 172

  Fly   205 GTDGKLRVWTFPQMTLAAELAAHSKEIDDLDFSPDSKLIASISKDAQGLVWDLASGQLQHKLQWK 269
            ||||.:|||..|.:....|..||..||.||...||.||: ::..|.:..||.  ..||..:|||:
Mouse   173 GTDGHVRVWKVPSLEKVLEFKAHEGEIGDLTLGPDGKLV-TVGWDFKASVWQ--KDQLVTQLQWQ 234

  Fly   270 --------TPEGAKYLFKRCRYGTVEAQKDNYRLFTIANPLGKVGKQRG-FLQHWDCASG-QLRQ 324
                    ||    |.::.||:|.|..|....||||:..|..::.:... :|..||.::. .||.
Mouse   235 ENGPASSNTP----YRYQACRFGQVPDQLGGLRLFTVQIPHKRLRQPPPCYLTAWDSSTFLPLRT 295

  Fly   325 AVAIDESLSSLAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLPITNEE- 388
            .....|.:|.|:|.|.|.|:.:||: :|||::||||||||:.::..||.:.||.:.|||   |: 
Mouse   296 RSCGHEVISCLSVSDSGTFLGLGTV-TGSVAIYIAFSLQRLYYVKEAHGIVVTDVTFLP---EKG 356

  Fly   389 -GPPISSDTEAAVLSISVDNKVCIHSLSQRRTIPAWIAIVFLIVMIFAVFVL 439
             ||.:....|.|:.|::||::..:|.|..||::|.|:.::..:.:|....:|
Mouse   357 CGPKLLGPHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9175NP_608995.2 WD40 <190..>421 CDD:225201 90/242 (37%)
WD40 190..>420 CDD:295369 90/241 (37%)
WD40 repeat 190..226 CDD:293791 15/35 (43%)
WD40 repeat 231..267 CDD:293791 12/35 (34%)
WD40 repeat 296..327 CDD:293791 8/32 (25%)
PrebNP_057912.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..135 5/41 (12%)
WD40 <140..354 CDD:225201 86/226 (38%)
WD 1 152..191 18/38 (47%)
WD40 159..>353 CDD:295369 76/201 (38%)
WD40 repeat 160..194 CDD:293791 14/33 (42%)
WD 2 194..232 15/40 (38%)
WD40 repeat 199..232 CDD:293791 12/35 (34%)
WD40 repeat 240..297 CDD:293791 18/60 (30%)
WD 3 298..337 20/39 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849092
Domainoid 1 1.000 126 1.000 Domainoid score I5413
eggNOG 1 0.900 - - E1_KOG0771
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40877
Inparanoid 1 1.050 203 1.000 Inparanoid score I3743
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48053
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004751
OrthoInspector 1 1.000 - - oto93533
orthoMCL 1 0.900 - - OOG6_104995
Panther 1 1.100 - - LDO PTHR23284
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3840
SonicParanoid 1 1.000 - - X5093
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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