DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9175 and Preb

DIOPT Version :10

Sequence 1:NP_608995.2 Gene:CG9175 / 33862 FlyBaseID:FBgn0031779 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_057912.2 Gene:Preb / 50907 MGIID:1355326 Length:417 Species:Mus musculus


Alignment Length:442 Identity:143/442 - (32%)
Similarity:216/442 - (48%) Gaps:56/442 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LARVNFPLYA--VDMLTSRHILVAGGGGSSKTGVANGFEIYELYHNGSHFCAEEVLRHETGANVV 74
            |.|..|||||  :|..|.. ::.|||||::|||:.||....:|........|..:..|:|.....
Mouse     9 LYRAPFPLYALRIDPKTGL-LIAAGGGGAAKTGIKNGVHFLQLELINGCLSASLLHSHDTETRAT 72

  Fly    75 MNFAVRNGGRRGYLCAGQEAHCQMYYVQPRVQSEEDGNGNGVGVGDGKPAPEERPHENGNVRQRN 139
            ||.|:..    ..|.|||:|.||:...|...|.......:|        :.|:.|.:........
Mouse    73 MNLALAG----DILAAGQDAQCQLLRFQVHQQKGSKAEKSG--------SKEQGPRQRKGAPPAE 125

  Fly   140 AHSGVEPVANGHRPPLSTADILRQFRRLHFDIQAADVIQTDFLKGAEPLQRVVRISGNGRLMATG 204
            ..||.:....|                :...::..:.:||||  ..||||:||..:.:..|:|||
Mouse   126 KKSGAQVHPEG----------------VELKVKNLEAVQTDF--SNEPLQKVVCFNHDNTLLATG 172

  Fly   205 GTDGKLRVWTFPQMTLAAELAAHSKEIDDLDFSPDSKLIASISKDAQGLVWDLASGQLQHKLQWK 269
            ||||.:|||..|.:....|..||..||.||...||.||: ::..|.:..||.  ..||..:|||:
Mouse   173 GTDGHVRVWKVPSLEKVLEFKAHEGEIGDLTLGPDGKLV-TVGWDFKASVWQ--KDQLVTQLQWQ 234

  Fly   270 --------TPEGAKYLFKRCRYGTVEAQKDNYRLFTIANPLGKVGKQRG-FLQHWDCASG-QLRQ 324
                    ||    |.::.||:|.|..|....||||:..|..::.:... :|..||.::. .||.
Mouse   235 ENGPASSNTP----YRYQACRFGQVPDQLGGLRLFTVQIPHKRLRQPPPCYLTAWDSSTFLPLRT 295

  Fly   325 AVAIDESLSSLAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLPITNEE- 388
            .....|.:|.|:|.|.|.|:.:||: :|||::||||||||:.::..||.:.||.:.|||   |: 
Mouse   296 RSCGHEVISCLSVSDSGTFLGLGTV-TGSVAIYIAFSLQRLYYVKEAHGIVVTDVTFLP---EKG 356

  Fly   389 -GPPISSDTEAAVLSISVDNKVCIHSLSQRRTIPAWIAIVFLIVMIFAVFVL 439
             ||.:....|.|:.|::||::..:|.|..||::|.|:.::..:.:|....:|
Mouse   357 CGPKLLGPHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9175NP_608995.2 WD40 <169..383 CDD:441893 84/223 (38%)
WD40 repeat 190..226 CDD:293791 15/35 (43%)
WD40 repeat 231..267 CDD:293791 12/35 (34%)
WD40 repeat 296..327 CDD:293791 8/32 (25%)
PrebNP_057912.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..135 5/41 (12%)
WD 1 152..191 18/38 (47%)
WD40 <160..353 CDD:441893 75/200 (38%)
WD40 repeat 160..194 CDD:293791 14/33 (42%)
WD 2 194..232 15/40 (38%)
WD40 repeat 199..232 CDD:293791 12/35 (34%)
WD40 repeat 240..297 CDD:293791 18/60 (30%)
WD 3 298..337 20/39 (51%)

Return to query results.
Submit another query.