DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9175 and sec-12

DIOPT Version :9

Sequence 1:NP_608995.2 Gene:CG9175 / 33862 FlyBaseID:FBgn0031779 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_492305.2 Gene:sec-12 / 172641 WormBaseID:WBGene00010496 Length:425 Species:Caenorhabditis elegans


Alignment Length:465 Identity:135/465 - (29%)
Similarity:209/465 - (44%) Gaps:104/465 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLARVNFPLYAVDMLTSRHILVAGGGGSSKTGVANGFEIYELYHNGS-----HFCAEEVLRHETG 70
            |:.....|.|.:..:.|||||||||||:|||||.|..:.: |:..||     .|.::.|.:.:||
 Worm    14 LIGESGIPAYCLKTIGSRHILVAGGGGASKTGVLNEIQTH-LFTTGSANQDVGFQSKCVGKFDTG 77

  Fly    71 ANVVMNFAVRNG----GRRGYLCAGQEAHCQMYYVQPRVQSEEDGNGNGVGVGDGKPAPEERPHE 131
            :...||..|...    ..:..:.||||..|.:|..:....:||:                     
 Worm    78 SMATMNMDVACAFDEISAKYVIAAGQENLCALYMTRAFKLNEEN--------------------- 121

  Fly   132 NGNVRQRNAHSGVEPVANGHRPPLSTADILRQFRRLHFDIQAADVIQTDFLKGAEPLQRVVRI-- 194
                                             ..|.|:||....:::|| ..:...|:.||.  
 Worm   122 ---------------------------------ECLSFEIQKVSQVRSDF-HASNSYQKCVRFDK 152

  Fly   195 SGNGRLMATGGTDGKLRVWTFPQMTLAAE---------LAAHSKEIDDLDFSPDSKLIASISKDA 250
            |..|::.||||.||.:|:|. .|:...||         :.||..::||:|||.|||.|.|:.  |
 Worm   153 SSRGKIFATGGADGHIRIWN-AQIVFRAENEDAQPILTIQAHKADVDDIDFSKDSKTIISVG--A 214

  Fly   251 QG-LVWDLASGQLQHKLQW--KTPEGAKYLFKRCRYGTVEAQKDNYRLFTIA-NPLGKVGK-QRG 310
            :| .:|...:|.....||:  :...|.|....||   |...:..|..:|..| |.:.|..| |..
 Worm   215 EGAFIWSTQTGARLLDLQFPIEISRGFKMRSIRC---TPLGKASNNTVFVAAYNSISKGSKDQAS 276

  Fly   311 FLQHW------DCASGQLRQAVAIDESLSSLAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIP 369
            ||..|      :.|...:.:.:|..:|:|||||.|.|.|.||||| ||||.::.....:|:...|
 Worm   277 FLSLWAFNSERNVARPVVTKLLAKGQSISSLAVSDCGNFTAVGTM-SGSVLVFDTHECRRLYFSP 340

  Fly   370 HAHSMFVTGLQFLPITN--------EEGPPISSDTEAAVLSISVDNKVCIHSL--SQRRTIPAWI 424
            .:|.:||||::|:..|:        .|.|.|:|..::||::::.|..:.:|.:  .|.:....::
 Worm   341 ESHGLFVTGIEFVSRTSPSICEDIQSETPGIASGFQSAVVTLAADKTMQLHRVPYPQPQPFSEYL 405

  Fly   425 AIVFLIVMIF 434
            .|:.|:.:||
 Worm   406 LIISLVCLIF 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9175NP_608995.2 WD40 <190..>421 CDD:225201 86/262 (33%)
WD40 190..>420 CDD:295369 86/261 (33%)
WD40 repeat 190..226 CDD:293791 15/46 (33%)
WD40 repeat 231..267 CDD:293791 14/36 (39%)
WD40 repeat 296..327 CDD:293791 10/38 (26%)
sec-12NP_492305.2 WD40 repeat 146..192 CDD:293791 15/46 (33%)
WD40 147..>349 CDD:392136 73/208 (35%)
WD40 repeat 197..236 CDD:293791 16/40 (40%)
WD40 repeat 244..284 CDD:293791 13/42 (31%)
WD40 repeat 304..339 CDD:293791 18/35 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166259
Domainoid 1 1.000 95 1.000 Domainoid score I4687
eggNOG 1 0.900 - - E1_KOG0771
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40877
Inparanoid 1 1.050 178 1.000 Inparanoid score I2685
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48053
OrthoDB 1 1.010 - - D356175at33208
OrthoFinder 1 1.000 - - FOG0004751
OrthoInspector 1 1.000 - - oto18800
orthoMCL 1 0.900 - - OOG6_104995
Panther 1 1.100 - - LDO PTHR23284
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3840
SonicParanoid 1 1.000 - - X5093
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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