DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9175 and PREB

DIOPT Version :9

Sequence 1:NP_608995.2 Gene:CG9175 / 33862 FlyBaseID:FBgn0031779 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_037520.1 Gene:PREB / 10113 HGNCID:9356 Length:417 Species:Homo sapiens


Alignment Length:446 Identity:142/446 - (31%)
Similarity:216/446 - (48%) Gaps:45/446 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAHTRRPSDGLLARVNFPLYAVDMLTSRHILV-AGGGGSSKTGVANGFEIYELYHNGSHFCAEEV 64
            |...|.|.   |.|..|||||:.:..|..:|: |||||::|||:.||....:|........|..:
Human     1 MGRRRAPE---LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLL 62

  Fly    65 LRHETGANVVMNFAVRNGGRRGYLCAGQEAHCQMYYVQPRVQSEEDGNGNGVGVGDGKPAPEERP 129
            ..|:|.....||.|:..    ..|.|||:||||:.    |.|:.:.........|..:..|.:| 
Human    63 HSHDTETRATMNLALAG----DILAAGQDAHCQLL----RFQAHQQQGNKAEKAGSKEQGPRQR- 118

  Fly   130 HENGNVRQRNAHSGVEPVANGHRPPLSTADILRQFRRLHFDIQAADVIQTDFLKGAEPLQRVVRI 194
                               .|..|.........|...|...::....:||||  .::|||:||..
Human   119 -------------------KGAAPAEKKCGAETQHEGLELRVENLQAVQTDF--SSDPLQKVVCF 162

  Fly   195 SGNGRLMATGGTDGKLRVWTFPQMTLAAELAAHSKEIDDLDFSPDSKLIASISKDAQGLVWDLAS 259
            :.:..|:|||||||.:|||..|.:....|..||..||:||...||.||: ::.:|.:..||.  .
Human   163 NHDNTLLATGGTDGYVRVWKVPSLEKVLEFKAHEGEIEDLALGPDGKLV-TVGRDLKASVWQ--K 224

  Fly   260 GQLQHKLQWK----TPEGAKYLFKRCRYGTVEAQKDNYRLFTIANPLGKVGKQRG-FLQHWDCAS 319
            .||..:|.|:    |.....|.::.||:|.|..|....||||:..|..::.:... :|..||.::
Human   225 DQLVTQLHWQENGPTFSSTPYRYQACRFGQVPDQPAGLRLFTVQIPHKRLRQPPPCYLTAWDGSN 289

  Fly   320 G-QLRQAVAIDESLSSLAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLP 383
            . .||......|.:|.|.|.:.|.|:.:||: :|||::|||||||.:.::..||.:.||.:.|||
Human   290 FLPLRTKSCGHEVVSCLDVSESGTFLGLGTV-TGSVAIYIAFSLQCLYYVREAHGIVVTDVAFLP 353

  Fly   384 ITNEEGPPISSDTEAAVLSISVDNKVCIHSLSQRRTIPAWIAIVFLIVMIFAVFVL 439
             ....||.:....|.|:.|::||::..:|.|..||::|.|:.::..:.:|....:|
Human   354 -EKGRGPELLGSHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLLCVGLIIVTILL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9175NP_608995.2 WD40 <190..>421 CDD:225201 85/236 (36%)
WD40 190..>420 CDD:295369 85/235 (36%)
WD40 repeat 190..226 CDD:293791 15/35 (43%)
WD40 repeat 231..267 CDD:293791 12/35 (34%)
WD40 repeat 296..327 CDD:293791 8/32 (25%)
PREBNP_037520.1 WD 1 4..50 21/48 (44%)
WD 2 58..97 15/46 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..130 5/48 (10%)
WD 3 127..183 22/57 (39%)
WD40 159..375 CDD:330360 79/220 (36%)
WD40 repeat 162..194 CDD:293791 13/31 (42%)
WD 4 187..224 14/39 (36%)
WD40 repeat 200..242 CDD:293791 14/44 (32%)
WD 5 230..287 16/56 (29%)
WD40 repeat 247..294 CDD:293791 13/46 (28%)
WD 6 291..329 14/38 (37%)
WD40 repeat 304..339 CDD:293791 17/35 (49%)
WD 7 334..385 16/51 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158694
Domainoid 1 1.000 122 1.000 Domainoid score I5653
eggNOG 1 0.900 - - E1_KOG0771
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40877
Inparanoid 1 1.050 208 1.000 Inparanoid score I3695
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48053
OrthoDB 1 1.010 - - D356175at33208
OrthoFinder 1 1.000 - - FOG0004751
OrthoInspector 1 1.000 - - oto89958
orthoMCL 1 0.900 - - OOG6_104995
Panther 1 1.100 - - LDO PTHR23284
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3840
SonicParanoid 1 1.000 - - X5093
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.