DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and STP4

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_010235.1 Gene:STP4 / 851512 SGDID:S000002206 Length:490 Species:Saccharomyces cerevisiae


Alignment Length:388 Identity:73/388 - (18%)
Similarity:113/388 - (29%) Gaps:145/388 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ELLDISKSPAKAVAVKKSP---AKDSATTKMVYYSANQLLIKTEQSSQAQFCLQV----PPPLTA 85
            |.:.:.::|......:|.|   |..:.|...:...:..||..|..||::.....:    |||||.
Yeast    18 ETMSLRRNPPFIDTPEKMPNPTASPNGTIHHLIDPSLPLLSSTTSSSRSTLSSTLNSPPPPPLTT 82

  Fly    86 TTTSVGLG-----------------------------VPPSGGQQEH--------FELLQTPQQR 113
            :.:|....                             .|.|.....|        |..|.|..:|
Yeast    83 SYSSYNSSACQSITSSPTDNTALAHNSKCYFPHSLSPTPLSSNSSSHVILPPISSFTNLITVAER 147

  Fly   114 QMQLQLQDQHQQEQQQFVS--YQLAIQQHQKQ-----------------QQQQQHESITNAAPTA 159
            :...:....|    ..|.|  .:..:..|:.:                 ....||:||...|...
Yeast   148 EFNGRSNSLH----ANFTSPVPRTVLDHHRHELTFCNPNNTTGFKTITPSPPTQHQSILPTAVDN 208

  Fly   160 APSAQRIKTEPVGGFPASAAVVSQVRKPSASKPQFKCDQCGMTFGSKSAHTSHTKSHSKNQDLSL 224
            .|.::.:.:.||.|||           |...|.|                          |...|
Yeast   209 VPRSKSVSSLPVSGFP-----------PLIVKQQ--------------------------QQQQL 236

  Fly   225 NGASGAGVAAPVSTAAIELNDAGLPVGIPKSPTI-KPLANVAAGADPYQCNVCQKTFAVPARLIR 288
            |.:|.|...                      |:| .||.|             :.|....:.|..
Yeast   237 NSSSSASAL----------------------PSIHSPLTN-------------EHTSRYSSSLKD 266

  Fly   289 HYRTHTGERPFECEFCHKLFSVKENLQVHRRIH--TKERPYKCDVCGRAFEHSGKLHRHMRIH 349
            ..:.....:..||..||..::   ||..|:..|  .::||:||.:|.|.|..:..|.||.:.|
Yeast   267 SAKITKQRKKKECPICHNFYA---NLSTHKSTHLTPEDRPHKCPICQRGFARNNDLIRHKKRH 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 0/19 (0%)
COG5048 <270..420 CDD:227381 21/82 (26%)
zf-C2H2 271..293 CDD:278523 2/21 (10%)
C2H2 Zn finger 273..293 CDD:275368 2/19 (11%)
zf-H2C2_2 286..309 CDD:290200 5/22 (23%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
zf-H2C2_2 313..338 CDD:290200 11/26 (42%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 344..366 CDD:290200 3/6 (50%)
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 370..396 CDD:290200
C2H2 Zn finger 385..407 CDD:275368
zf-H2C2_2 400..424 CDD:290200
C2H2 Zn finger 415..435 CDD:275368
zf-C2H2 441..463 CDD:278523
C2H2 Zn finger 443..463 CDD:275368
STP4NP_010235.1 COG5048 14..442 CDD:227381 73/388 (19%)
C2H2 Zn finger 279..296 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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