DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and STP3

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_013479.3 Gene:STP3 / 851089 SGDID:S000004367 Length:343 Species:Saccharomyces cerevisiae


Alignment Length:348 Identity:79/348 - (22%)
Similarity:122/348 - (35%) Gaps:124/348 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 SITNAAPTAAPSAQRIK------TEPVGGFPASAAVVSQVRKPSASKPQFKCDQCGMTFGSKSA- 208
            :|:|.:.:|..|:..:.      :..|....:|::.:..|::|              |.||.|| 
Yeast    48 NISNGSGSAGASSSMLSYQLLPHSNDVSRSNSSSSFLPSVQQP--------------TEGSASAS 98

  Fly   209 HTSHTKSHSKNQD--LSLNGAS---GAGVAAPVSTAAIELNDAGLPVGIPKSPTIKPLANVAAGA 268
            .||.:.|.|::..  |.:.|.|   ||||:.|.||   ::|              ||       .
Yeast    99 ETSSSASPSRSISPILKVAGPSSVGGAGVSTPHST---KIN--------------KP-------R 139

  Fly   269 DPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVHRRIH--TKERPYKCDV 331
            ...||.:|:..:|                               ||..|:..|  .::||:||.:
Yeast   140 KKKQCPICRNFYA-------------------------------NLTTHKATHLTPEDRPHKCPI 173

  Fly   332 CGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVIHM------------RTHTGEKPYK 384
            |.|.|..:..|.||.:.|..         ::...|||.|..|.            .||....|. 
Yeast   174 CHRGFARNNDLLRHKKRHWK---------DEILSQSGVLSNHNDGKGGSVSPNDDDTHEKMTPM- 228

  Fly   385 CPEPGCGKGFTCSKQLK-VHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTI--- 445
                   ...|...||| :|....|.:.|::..:...|... :..||..:....|.|::..:   
Yeast   229 -------NSVTDYAQLKSLHQIKGTFKCPFNSTLIQLDMDM-YPYKLKPLNFETSNCHQTGVFSR 285

  Fly   446 CDETFKNKKEMEAHIKGHANEVP 468
            || ||||      |:|....|.|
Yeast   286 CD-TFKN------HLKALHFEYP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 7/20 (35%)
COG5048 <270..420 CDD:227381 34/164 (21%)
zf-C2H2 271..293 CDD:278523 4/21 (19%)
C2H2 Zn finger 273..293 CDD:275368 3/19 (16%)
zf-H2C2_2 286..309 CDD:290200 0/22 (0%)
C2H2 Zn finger 301..321 CDD:275368 3/19 (16%)
zf-H2C2_2 313..338 CDD:290200 11/26 (42%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 344..366 CDD:290200 3/21 (14%)
C2H2 Zn finger 357..377 CDD:275368 5/31 (16%)
zf-H2C2_2 370..396 CDD:290200 5/37 (14%)
C2H2 Zn finger 385..407 CDD:275368 5/22 (23%)
zf-H2C2_2 400..424 CDD:290200 6/24 (25%)
C2H2 Zn finger 415..435 CDD:275368 3/19 (16%)
zf-C2H2 441..463 CDD:278523 8/24 (33%)
C2H2 Zn finger 443..463 CDD:275368 8/22 (36%)
STP3NP_013479.3 COG5048 <137..295 CDD:227381 48/220 (22%)
C2H2 Zn finger 144..161 CDD:275368 6/47 (13%)
C2H2 Zn finger 171..191 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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