DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Kr-h1 and AT3G29340

DIOPT Version :9

Sequence 1:	NP_477466.1	Gene:	Kr-h1 / 33861	FlyBaseID:	FBgn0266450	Length:	845	Species:	Drosophila melanogaster
Sequence 2:	NP_189580.1	Gene:	AT3G29340 / 822592	AraportID:	AT3G29340	Length:	650	Species:	Arabidopsis thaliana

Alignment Length:	631	Identity:	114/631 - (18%)
Similarity:	200/631 - (31%)	Gaps:	236/631 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly   117 LQLQDQHQQE--QQQFVSYQLAIQQHQKQQQQQQHESITNAAPTAAPSAQRI-KTEPVGGFPASA 178
            ||.:..|:.:  .:.|..|| |:..||:..:               |..::: |.|....:|..:
plant    37 LQSKSSHKCKICGKSFECYQ-ALGGHQRIHR---------------PIKEKLSKQEFSEVYPRKS 85

  Fly   179 AVVSQVRKPSASKPQFKCDQCGMTFGSKSAHTSHTKSH---------SKNQDLSLNGASGAGVAA 234
            .:   .::|.:|...::|..||..||.......|||.|         :::::..|:.:....:.:
plant    86 KL---QKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVS 147

  Fly   235 PVSTAAIELNDAGLPVGIPKSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHT-GERP 298
            ..|:..:...:..|.....|....:||::               :.|:|:.|....:|.| .:..
plant   148 QPSSFKVSQEEKFLHCVELKQDFSEPLSH---------------SGALPSTLRSKLQTKTQWKSS 197

  Fly   299 FECEFCHKLFSVKENLQVHRRIHTK-------ERPYKCDVCGRAFEHSGKLHRHMR------IHT 350
            ..|:.|.|.|...:.|..|:|:|.:       :|.|..|.  ..|..|.|..:.::      :..
plant   198 CHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDY--NPFSDSLKAKKIVKKPSSFEVSQ 260

  Fly   351 GERPHKCSVCEKTFIQSGQLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGEKP--- 412
            .|:...|...::.|   |:|:.|              .|..|..:|||.:||.......||.
plant   261 EEKILHCVELKQDF---GELLAH--------------SGFDKSISCSKSIKVKKVARKNEKTEDS 308

  Fly   413 ---------------YHCDICFRDFG-----YNHVLKLHRVQH------------YGSK------ 439
                           :.|..|.|.||     |.| .::|...|            :|.|
plant   309 TSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGH-QRMHSGNHNRIEDENGLERIWGLKKKSRVC 372

  Fly   440 ----------------------------------------------------------C------ 440
                                                                      |
plant   373 SVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKL 437

  Fly   441 -------YKCTICDETFKNKKEMEAHIKGHA-NEVPDDEAEAAAASAAASTSAGSSAGSPSLQGV 497
                   |||:||:::|...:.:.:|.:.|. ..||..|.....:|...|:.|......||
plant   438 QKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPS---- 498

  Fly   498 SSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATL------------SIPTSSPLSPSSLSST 550
                 |..|              |::.::.:.|...|            ...|.|.:..|:|.|
plant   499 -----SFEH--------------AQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPS- 543

  Fly   551 YSPSASSMASPPPTSAHYLPVQMEADALSR-DSGVSSAQP-AHSTY 594
             .|.|..:.|.||:    ..|.::...|.| :..::.::| |||.:
plant   544 -PPEAKKIVSQPPS----FEVSVDEKILYRAEPKLNFSEPLAHSCF 584

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Kr-h1	NP_477466.1	C2H2 Zn finger	196..216	CDD:275368	8/19 (42%)
		COG5048	<270..420	CDD:227381	36/181 (20%)
		zf-C2H2	271..293	CDD:278523	3/21 (14%)
		C2H2 Zn finger	273..293	CDD:275368	3/19 (16%)
		zf-H2C2_2	286..309	CDD:290200	6/23 (26%)
		C2H2 Zn finger	301..321	CDD:275368	7/19 (37%)
		zf-H2C2_2	313..338	CDD:290200	8/31 (26%)
		C2H2 Zn finger	329..349	CDD:275368	4/25 (16%)
		zf-H2C2_2	344..366	CDD:290200	3/27 (11%)
		C2H2 Zn finger	357..377	CDD:275368	5/19 (26%)
		zf-H2C2_2	370..396	CDD:290200	4/25 (16%)
		C2H2 Zn finger	385..407	CDD:275368	7/21 (33%)
		zf-H2C2_2	400..424	CDD:290200	9/46 (20%)
		C2H2 Zn finger	415..435	CDD:275368	8/24 (33%)
		zf-C2H2	441..463	CDD:278523	7/21 (33%)
		C2H2 Zn finger	443..463	CDD:275368	5/19 (26%)
AT3G29340	NP_189580.1	zf-C2H2_6	43..68	CDD:290623	7/40 (18%)
		C2H2 Zn finger	45..65	CDD:275368	6/20 (30%)
		C2H2 Zn finger	100..120	CDD:275368	8/19 (42%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24390
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100