DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and znf740a

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:XP_005172837.1 Gene:znf740a / 571608 ZFINID:ZDB-GENE-030131-5064 Length:543 Species:Danio rerio


Alignment Length:372 Identity:112/372 - (30%)
Similarity:157/372 - (42%) Gaps:45/372 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QRQMQLQLQDQHQ-------------QEQQQFVSYQLAIQQHQKQQQQQQHESITNAAPTAAPSA 163
            ||.||.:....|.             :::..|.:.:|..::..:..:..|.:..|..:.|  ||.
Zfish    56 QRDMQERGTQGHMVLPTSMTCPPLLLRKEADFTAPRLLDEKEMRPSEDMQLKKKTRKSGT--PSK 118

  Fly   164 QRIKTEPVGGFPASAAVVSQVRKPSASKPQ--FKCDQCGMTFGSKSAHTSHTKSHSKNQDLSLNG 226
            .|   |..|  ||..|||.:......||.|  |.||.|...|.|......|...|:..:      
Zfish   119 VR---EQDG--PAGKAVVDENGNCPLSKVQKNFICDHCYGAFRSGYHLKRHILIHTGEK------ 172

  Fly   227 ASGAGVAAPVSTAAIELNDAGLPVGIPKSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYR 291
                    |.:.|..::.       ..:...::..:....|..||.|::|...|.....|.||..
Zfish   173 --------PFACAVCDMR-------FIQRYHLERHSLTHTGVKPYACSMCDMRFFQRYHLERHSL 222

  Fly   292 THTGERPFECEFCHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHK 356
            ||||.:|:.|..|...|..:.:||.|..|||..:||.|.:|.|.|.....|.||...|||.:|:.
Zfish   223 THTGVKPYACTMCDMRFFQRYHLQRHSLIHTGVKPYACSMCDRRFFQRYHLQRHSLTHTGVKPYA 287

  Fly   357 CSVCEKTFIQSGQLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRD 421
            ||:|:..|.|...|..|..||||.||:.|..  |...|.....|:.||.||||.|||.|.:|...
Zfish   288 CSICDMRFFQRYHLQRHSLTHTGVKPFACTM--CDMRFFQRYHLQRHSITHTGVKPYACSMCDMR 350

  Fly   422 FGYNHVLKLHRVQHYGSKCYKCTICDETFKNKKEMEAHIKGHANEVP 468
            |.:.:.|:.|.:.|.|.|.|.||:||..|..:..::.|...|....|
Zfish   351 FFHRYHLQRHSLTHTGVKPYACTMCDMRFFQRYHLQRHSLTHTGVKP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 6/19 (32%)
COG5048 <270..420 CDD:227381 63/149 (42%)
zf-C2H2 271..293 CDD:278523 7/21 (33%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..309 CDD:290200 10/22 (45%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
zf-H2C2_2 313..338 CDD:290200 12/24 (50%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 344..366 CDD:290200 10/21 (48%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
zf-H2C2_2 370..396 CDD:290200 11/25 (44%)
C2H2 Zn finger 385..407 CDD:275368 6/21 (29%)
zf-H2C2_2 400..424 CDD:290200 13/23 (57%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-C2H2 441..463 CDD:278523 7/21 (33%)
C2H2 Zn finger 443..463 CDD:275368 6/19 (32%)
znf740aXP_005172837.1 COG5048 138..503 CDD:227381 92/283 (33%)
C2H2 Zn finger 148..168 CDD:275368 6/19 (32%)
C2H2 Zn finger 176..196 CDD:275368 1/26 (4%)
C2H2 Zn finger 204..224 CDD:275368 6/19 (32%)
C2H2 Zn finger 232..252 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..280 CDD:275368 7/19 (37%)
C2H2 Zn finger 288..308 CDD:275368 7/19 (37%)
C2H2 Zn finger 316..336 CDD:275368 6/21 (29%)
C2H2 Zn finger 344..364 CDD:275368 5/19 (26%)
C2H2 Zn finger 372..392 CDD:275368 6/19 (32%)
C2H2 Zn finger 400..420 CDD:275368
C2H2 Zn finger 428..448 CDD:275368
C2H2 Zn finger 456..476 CDD:275368
C2H2 Zn finger 484..503 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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