DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and vezf1b

DIOPT Version :10

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001073432.1 Gene:vezf1b / 556915 ZFINID:ZDB-GENE-060825-121 Length:460 Species:Danio rerio


Alignment Length:492 Identity:110/492 - (22%)
Similarity:180/492 - (36%) Gaps:144/492 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 HQKQQQQQQHESITNAAPTAAPSAQRIKTEPVGGFPASAAVVSQVRKPSASKPQFKCDQCGMTFG 204
            ||.|..|.....:.|:.|.        ..:||...|...      :.|..|....|.:..|.|.|
Zfish    19 HQHQVNQNSLLPLLNSEPQ--------DQKPVLPIPLDQ------KPPIISSDLLKDNMGGGTGG 69

  Fly   205 SKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVSTAAIELNDAGLPVGIPKSPTIKPLANVAAGAD 269
                                 |..|.|               |.||.|.|.|..|         .
Zfish    70 ---------------------GGGGGG---------------GGPVVIKKEPKSK---------T 89

  Fly   270 PYQCNVCQKTFAVPARLIRHYRTHTG----ERPFECEFCHKLFSV-----KEN------------ 313
            |:.|:.|.|.|.....|.||...|||    .||.:......:..:     ::|            
Zfish    90 PFICSYCSKAFRDSYHLRRHESCHTGIKMVSRPKKTTTAPTMVPLISTVPRDNNGNPSYVSTVAG 154

  Fly   314 ------------------LQVHRRIHTKERP------YKCDVCGRAFEHSGKLHRHMRIHTGERP 354
                              |...:....|:.|      :.|::||:||.....|:||...|:.|:|
Zfish   155 ILTTATTSASTAAGIMSVLPQQQPTVPKKPPKPVKKNHGCEMCGKAFRDVYHLNRHKLSHSDEKP 219

  Fly   355 HKCSVCEKTFIQSGQLVIHMRTHTG--EKPYKCPEPGCGKGFTCSKQLKVH-SRTHTGEKPYHCD 416
            .:|.:|.:.|.:..::..|:|:|.|  .|||.|..  |||||:....|..| ...|:.|:|:.|.
Zfish   220 FECPICHQRFKRKDRMTYHVRSHDGGVHKPYICSV--CGKGFSRPDHLSCHVKHVHSTERPFKCQ 282

  Fly   417 I--CFRDFGYNHVLKLHRVQHYGSKCYKCTICDETFKNKKEMEAHIKGH------------ANEV 467
            :  |...|.....|:.|.::|.|.  ..|.||.:.. :...:.:|:|.|            :|.|
Zfish   283 VTACTSAFATKDRLRSHMIRHEGK--VTCNICGKML-SAAYITSHLKTHGQTGFTSTCNKDSNNV 344

  Fly   468 PDDEAEAAAASAAASTSAGSSAGSPSLQGVSSN--------SESSNHSPPSSPPATKKPRQARQP 524
            .:   .|:|....|||::.::|   .::|.:||        :.::|....:||.:.:.|.....|
Zfish   345 CN---SASATPVTASTASNTTA---MIRGSASNPVTIAAQMNITTNTVNITSPVSLQHPVTITAP 403

  Fly   525 RVSKTVAATLSIPTSSPLSPSSLSSTYSPSASSMASP 561
                ...|:::||.::|::.:...:..||.:.::..|
Zfish   404 ----VNIASVNIPATAPMNIAHPVAITSPMSMNITGP 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 3/19 (16%)
COG5048 <270..420 CDD:227381 51/199 (26%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 2/54 (4%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 5/19 (26%)
C2H2 Zn finger 385..407 CDD:275368 8/22 (36%)
C2H2 Zn finger 415..435 CDD:275368 5/21 (24%)
zf-C2H2 441..463 CDD:395048 5/21 (24%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
vezf1bNP_001073432.1 C2H2 Zn finger 93..113 CDD:275368 7/19 (37%)
C2H2 Zn finger 194..214 CDD:275368 8/19 (42%)
SFP1 <216..273 CDD:227516 20/58 (34%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..270 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..303 CDD:275368 5/21 (24%)
C2H2 Zn finger 309..328 CDD:275368 5/19 (26%)

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