DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and zgc:113102

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:XP_009297414.1 Gene:zgc:113102 / 503754 ZFINID:ZDB-GENE-050306-35 Length:281 Species:Danio rerio


Alignment Length:273 Identity:94/273 - (34%)
Similarity:124/273 - (45%) Gaps:51/273 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 CDQCGMTFGSKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVSTAAIELNDAGLPVGIPKSPTIKP 260
            |.|||.:..:|.:..:|...|:                                           
Zfish    23 CTQCGTSLFNKQSLRNHMMIHT------------------------------------------- 44

  Fly   261 LANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVHRRIHTKER 325
                  |..|:.|:.|..:|...:...||...||||:..:|:.|.|.|.....|:.|.|:||:.:
Zfish    45 ------GEKPFTCSQCGMSFRHSSNFGRHMLVHTGEKTHQCDQCGKTFLRASALKRHLRVHTEGK 103

  Fly   326 PYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVIHMRTHTGEKPYKCPEPGC 390
            ||.|.|||:.|.|......|.:||||.|.|.|..||||||.:.:|.||.||||||:||||..  |
Zfish   104 PYSCTVCGKTFRHEDGFKNHQKIHTGMREHICLECEKTFITAVKLKIHERTHTGERPYKCSH--C 166

  Fly   391 GKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDETFKNKKE 455
            .|.|:....|..|.|.|||||||.|..|.:.|..:.:||.|...|.|.|.|||:.||:.|.....
Zfish   167 DKRFSQLGSLIKHKRIHTGEKPYKCSYCDKRFNQSGILKKHERIHTGEKPYKCSHCDKRFNQSGI 231

  Fly   456 MEAHIKGHANEVP 468
            ::.|.:.|..|.|
Zfish   232 LKTHERIHTGEKP 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 6/19 (32%)
COG5048 <270..420 CDD:227381 69/149 (46%)
zf-C2H2 271..293 CDD:278523 5/21 (24%)
C2H2 Zn finger 273..293 CDD:275368 5/19 (26%)
zf-H2C2_2 286..309 CDD:290200 9/22 (41%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zf-H2C2_2 313..338 CDD:290200 12/24 (50%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 344..366 CDD:290200 13/21 (62%)
C2H2 Zn finger 357..377 CDD:275368 11/19 (58%)
zf-H2C2_2 370..396 CDD:290200 16/25 (64%)
C2H2 Zn finger 385..407 CDD:275368 7/21 (33%)
zf-H2C2_2 400..424 CDD:290200 13/23 (57%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-C2H2 441..463 CDD:278523 7/21 (33%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
zgc:113102XP_009297414.1 C2H2 Zn finger 23..43 CDD:275368 6/19 (32%)
zf-H2C2_2 35..60 CDD:290200 7/73 (10%)
C2H2 Zn finger 51..71 CDD:275368 5/19 (26%)
C2H2 Zn finger 79..99 CDD:275368 7/19 (37%)
C2H2 Zn finger 107..127 CDD:275368 7/19 (37%)
C2H2 Zn finger 135..155 CDD:275368 11/19 (58%)
zf-H2C2_2 148..172 CDD:290200 16/25 (64%)
C2H2 Zn finger 163..183 CDD:275368 7/21 (33%)
zf-H2C2_2 175..200 CDD:290200 13/24 (54%)
C2H2 Zn finger 191..211 CDD:275368 6/19 (32%)
zf-H2C2_2 204..228 CDD:290200 12/23 (52%)
C2H2 Zn finger 219..239 CDD:275368 5/19 (26%)
C2H2 Zn finger 247..267 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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