DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and CG6654

DIOPT Version :10

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:472 Identity:136/472 - (28%)
Similarity:196/472 - (41%) Gaps:95/472 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LTATTTSVGLGVPPSGGQQEHFELLQTPQQRQMQLQLQDQ-HQQEQQQFVSYQLAI----QQHQK 142
            |..:|.||.|.. ...|:...:||...|.::...|.||.| :.:::::.|..|..:    ..|:.
  Fly   135 LIKSTISVDLDY-EGEGEVFDYELPDEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHEL 198

  Fly   143 QQQ------------QQQHESITNAAP--TAAPSAQRIKTE--------PVGG-----------F 174
            :||            ..:.|.||..||  |...||.::.|:        |||.           .
  Fly   199 EQQIRECNLAIFEGVDNEAEIITVTAPQVTTRKSAAKLLTQQENDKHQTPVGSKEEARELEKEQV 263

  Fly   175 PASA-------AVVSQ--------------------------------VRKPS-----ASKPQFK 195
            |.||       .||.|                                |..||     |:.|:.|
  Fly   264 PQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELK 328

  Fly   196 --CDQCGMTFGSKSAHTSHTKSHS-KNQDLSLNGASGAGVAA------PVSTAAIELNDAGLPVG 251
              ||:|...|..:.:...|.:... .|::...|......|:.      ..|..|....:.|:...
  Fly   329 YHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGAHNCPECGIRCD 393

  Fly   252 IPKSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQV 316
             .|....|.:..........|||:|||.|.:.:.|..|.|.||||:||.|..|.|.|:...||:.
  Fly   394 -SKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQ 457

  Fly   317 HRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVIHMRTHTGEK 381
            |:..|::.:.:||::|..:|....:|..|.|.|||::|.:|.||...|..|..|..|.|.||||:
  Fly   458 HKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGER 522

  Fly   382 PYKCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTIC 446
            ||.|..  |...||....||.|.||||||:||.|..|.:.|......::|:..|.|.:.|.|.:|
  Fly   523 PYACDL--CPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVC 585

  Fly   447 DETFKNKKEMEAHIKGH 463
            :|.||:..||.:|:.||
  Fly   586 NEEFKSMPEMRSHLAGH 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 5/19 (26%)
COG5048 <270..420 CDD:227381 66/149 (44%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..407 CDD:275368 8/21 (38%)
C2H2 Zn finger 415..435 CDD:275368 4/19 (21%)
zf-C2H2 441..463 CDD:395048 9/21 (43%)
C2H2 Zn finger 443..463 CDD:275368 8/19 (42%)
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368 5/22 (23%)
COG5048 <357..570 CDD:227381 74/215 (34%)
C2H2 Zn finger 360..380 CDD:275368 2/19 (11%)
C2H2 Zn finger 385..406 CDD:275370 3/21 (14%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
C2H2 Zn finger 442..490 CDD:275368 15/47 (32%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
C2H2 Zn finger 526..546 CDD:275368 8/21 (38%)
C2H2 Zn finger 554..574 CDD:275368 4/19 (21%)
C2H2 Zn finger 582..602 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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