DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and CG10147

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001261477.1 Gene:CG10147 / 38733 FlyBaseID:FBgn0035702 Length:448 Species:Drosophila melanogaster


Alignment Length:277 Identity:68/277 - (24%)
Similarity:105/277 - (37%) Gaps:76/277 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 YQCNVCQKTFAVPARLIRHYRTHTGERPFEC---------------------------------E 302
            |:|::|...|....|||.|.:.|.|...:.|                                 |
  Fly   169 YKCDLCADEFREEKRLILHKKEHQGHMLYHCTEPGCEEAFNRFENLRQHELEHSEVGMRFVCEEE 233

  Fly   303 FCHKLFSVKENLQVHR-RIHTKERPYK---CDVCGRAFEHSGKLHRHMRIHTGER---PHKCSV- 359
            .|::::..|.:|:.|: :.|...:|.|   |:.|||.|:....|.:|...| |::   |:.|.: 
  Fly   234 GCNRMYRHKASLKYHQSKAHDIGKPLKTHMCEFCGRVFKTGSALSQHRFTH-GDQLVLPYACELP 297

  Fly   360 -CEKTFIQSGQLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGE------------- 410
             |...|..:.:|.|||..|.|.|.:.||.  ||...|...:|::|...||.|             
  Fly   298 ECSMRFYSTEKLKIHMMRHQGIKNFSCPY--CGLKKTTKNELRLHINYHTLERTWSCKDCPKVCN 360

  Fly   411 ----------------KPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDETFKNKKEMEAH 459
                            :.|.|..|.:.|......|.|.:.|.|.|.::|.:|.:.|.....:..|
  Fly   361 SSTSLKKHIRAIHEKARDYACSYCEKKFATTDTRKYHEMTHTGEKNFECHVCGKKFIQPSALRTH 425

  Fly   460 IKGHANEVPDDEAEAAA 476
            .|.|  |..|::..|.|
  Fly   426 RKVH--ESGDNQQTACA 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368
COG5048 <270..420 CDD:227381 52/219 (24%)
zf-C2H2 271..293 CDD:278523 8/21 (38%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..309 CDD:290200 8/55 (15%)
C2H2 Zn finger 301..321 CDD:275368 6/53 (11%)
zf-H2C2_2 313..338 CDD:290200 10/28 (36%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 344..366 CDD:290200 7/26 (27%)
C2H2 Zn finger 357..377 CDD:275368 7/21 (33%)
zf-H2C2_2 370..396 CDD:290200 11/25 (44%)
C2H2 Zn finger 385..407 CDD:275368 7/21 (33%)
zf-H2C2_2 400..424 CDD:290200 9/52 (17%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-C2H2 441..463 CDD:278523 5/21 (24%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
CG10147NP_001261477.1 zf-AD 7..80 CDD:214871
C2H2 Zn finger 171..191 CDD:275368 7/19 (37%)
zf-C2H2_8 199..287 CDD:292531 18/88 (20%)
C2H2 Zn finger 199..221 CDD:275368 1/21 (5%)
C2H2 Zn finger 230..253 CDD:275368 5/22 (23%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
C2H2 Zn finger 294..316 CDD:275368 7/21 (33%)
C2H2 Zn finger 324..344 CDD:275368 7/21 (33%)
C2H2 Zn finger 352..373 CDD:275368 0/20 (0%)
C2H2 Zn finger 381..401 CDD:275368 5/19 (26%)
C2H2 Zn finger 409..429 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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