DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and Kr

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001261181.1 Gene:Kr / 38012 FlyBaseID:FBgn0001325 Length:502 Species:Drosophila melanogaster


Alignment Length:554 Identity:138/554 - (24%)
Similarity:189/554 - (34%) Gaps:170/554 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LQVPPPLTATT--TSVGLGVPPSGGQQ----EHFELLQTPQQRQMQLQLQDQHQQEQQQFVSYQL 135
            :.:.||::|.|  ||.....|..|.||    ..|.:|...|......|......|.....::..|
  Fly    32 MSLSPPMSANTSATSAAAIYPAMGLQQAAAASAFGMLSPTQLLAANRQAAAFMAQLPMSTLANTL 96

  Fly   136 ------------AIQQHQKQQQQQQHESITNAAPTAAPSAQRIKTEPVGG--------------- 173
                        |.||....|....|      :|.|:|.:.  .:.|:|.               
  Fly    97 FPHNPAALFGAWAAQQSLPPQGTHLH------SPPASPHSP--LSTPLGSGKHPLNSPNSTPQHH 153

  Fly   174 FPASAAVVSQVRKPSASKPQFKCDQCGMTFGSKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVST 238
            .||..|....|:|...::.....:....|.|...:..|...|.:...|       |||       
  Fly   154 EPAKKARKLSVKKEFQTEISMSVNDMYHTSGGPISPPSSGSSPNSTHD-------GAG------- 204

  Fly   239 AAIELNDAGLPVGIPKSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEF 303
                 .:||. ||:.|.|         :....:.|.:|.::|.....|..|.||||||:||||..
  Fly   205 -----GNAGC-VGVSKDP---------SRDKSFTCKICSRSFGYKHVLQNHERTHTGEKPFECPE 254

  Fly   304 CHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSG 368
            |||.|:...:|:.|.|:||.|:||.|..|.|.|.....|.||:|:||||||:.|.:|:       
  Fly   255 CHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYTCEICD------- 312

  Fly   369 QLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRV 433
                                  || |:.|.|||.|...|.||||:.|:.|...|...|    |.:
  Fly   313 ----------------------GK-FSDSNQLKSHMLVHNGEKPFECERCHMKFRRRH----HLM 350

  Fly   434 QHYGSKCYKC-----------------------TICDETFKNKKEMEAHIKGHANE-------VP 468
            .|      ||                       .|..|...|:........|.:||       .|
  Fly   351 NH------KCGIQSPPTPALSPAMSGDYPVAISAIAIEASTNRFAAMCATYGGSNESVDMEKATP 409

  Fly   469 DDEAEAAAASAAASTSAGSSAGSPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAAT 533
            :|:.....          |..|:.|:.|..||.            |.:|.:..|  ||.:..   
  Fly   410 EDDGPLDL----------SEDGASSVDGHCSNI------------ARRKAQDIR--RVFRLP--- 447

  Fly   534 LSIPTSSPLSPSSLSSTYSPSASSMASPPPTSAH 567
               |...|..||.:.....|...||.||....:|
  Fly   448 ---PPQIPHVPSDMPEQTEPEDLSMHSPRSIGSH 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 3/19 (16%)
COG5048 <270..420 CDD:227381 58/149 (39%)
zf-C2H2 271..293 CDD:278523 6/21 (29%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..309 CDD:290200 15/22 (68%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
zf-H2C2_2 313..338 CDD:290200 12/24 (50%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
zf-H2C2_2 344..366 CDD:290200 11/21 (52%)
C2H2 Zn finger 357..377 CDD:275368 2/19 (11%)
zf-H2C2_2 370..396 CDD:290200 3/25 (12%)
C2H2 Zn finger 385..407 CDD:275368 8/21 (38%)
zf-H2C2_2 400..424 CDD:290200 11/23 (48%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-C2H2 441..463 CDD:278523 5/44 (11%)
C2H2 Zn finger 443..463 CDD:275368 4/42 (10%)
KrNP_001261181.1 C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
zf-H2C2_2 237..261 CDD:290200 16/23 (70%)
C2H2 Zn finger 252..272 CDD:275368 8/19 (42%)
zf-H2C2_2 264..289 CDD:290200 12/24 (50%)
C2H2 Zn finger 280..300 CDD:275368 8/19 (42%)
zf-H2C2_2 292..316 CDD:290200 14/53 (26%)
C2H2 Zn finger 308..328 CDD:275368 10/49 (20%)
zf-H2C2_2 321..345 CDD:290200 11/23 (48%)
C2H2 Zn finger 336..352 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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