DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and pita

DIOPT Version :10

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:470 Identity:121/470 - (25%)
Similarity:177/470 - (37%) Gaps:98/470 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KDVLKKSGTEL------------LDISKSPAKAVAVKK---SPAK---DSATTKMVYYSANQLLI 65
            |.:.|::.|.|            |:..::|...||.||   .|||   .|.|.|.        |:
  Fly    80 KQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKK--------LL 136

  Fly    66 KTEQSSQAQFCL---QVPPPLTATTTSVGLGVPPSGGQQEHFEL-LQTPQQRQM---QLQLQDQH 123
            .|...|.:|..:   ||......|..:|. |..|...:...:|| :...|:..|   |..|:|..
  Fly   137 NTMAKSSSQVIIEDVQVLESAMVTPRTVA-GSSPVPRRSHAYELKVDNNQELSMDDVQSMLEDMA 200

  Fly   124 QQEQQQFVSYQLAIQQHQKQQQQQQHESITNAAPTAAPSAQRIKTEPVGGFPASAAVVSQVRKPS 188
            .:.:::|..........:.:...:....|.|..| |||...|:.|                    
  Fly   201 SELEKEFPDIPQKASPVKPKVLNKSSIRILNKGP-AAPVEPRLAT-------------------- 244

  Fly   189 ASKPQFKCDQCGMTFGSKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVSTAAIELNDAGLPVGIP 253
               |:.|.|..|                              .||     ...|:.|:.||:...
  Fly   245 ---PKVKRDDSG------------------------------NVA-----IVTEVLDSDLPLDDQ 271

  Fly   254 KSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEFCHKLFSVKENLQVHR 318
            ..|| |....||  .|.:.|..|:::|.:...|..|...||..|.|:|..|.|.|..|.:|..|.
  Fly   272 DDPT-KNAEKVA--TDVFPCPDCERSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSKYDLAKHN 333

  Fly   319 RIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVIHMRTHTGEKPY 383
            .:||.|||:||.:|.:||.....||||.|.||......|..|||.|:...::..|...|..::|:
  Fly   334 FVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKRPF 398

  Fly   384 KCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGSKCYKCTICDE 448
            :|..  |.|.|...:.|:.|...|:...|:.|..|.|.|.....|..|.|.|.|.:.|.|..|.:
  Fly   399 QCGV--CTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHK 461

  Fly   449 TFKNKKEMEAHIKGH 463
            ::.....:..|::.|
  Fly   462 SYMLSHHLSRHLRTH 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 2/19 (11%)
COG5048 <270..420 CDD:227381 51/149 (34%)
C2H2 Zn finger 273..293 CDD:275368 5/19 (26%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 9/19 (47%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..407 CDD:275368 6/21 (29%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-C2H2 441..463 CDD:395048 4/21 (19%)
C2H2 Zn finger 443..463 CDD:275368 3/19 (16%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871 4/11 (36%)
COG5048 <281..506 CDD:227381 66/200 (33%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 7/19 (37%)
C2H2 Zn finger 344..364 CDD:275368 9/19 (47%)
C2H2 Zn finger 372..388 CDD:275370 5/15 (33%)
C2H2 Zn finger 400..420 CDD:275368 6/21 (29%)
C2H2 Zn finger 428..448 CDD:275368 7/19 (37%)
C2H2 Zn finger 456..476 CDD:275368 3/19 (16%)
C2H2 Zn finger 486..506 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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