DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and fezf-1

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_502594.2 Gene:fezf-1 / 3564888 WormBaseID:WBGene00012639 Length:218 Species:Caenorhabditis elegans


Alignment Length:219 Identity:75/219 - (34%)
Similarity:106/219 - (48%) Gaps:17/219 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 LPVGIPKSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTGE-----RPFECEFCHKL 307
            :.|.:..||:.|.|.. ::|..|:........||         .:.:|:     :.|.||.|.|.
 Worm     6 IEVLLADSPSPKSLCR-SSGIFPFPLPSSNSIFA---------ESSSGDDENSRKKFPCEICGKQ 60

  Fly   308 FSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVI 372
            |:...||..|..:||.|||:.|.|||:||..:..|.||..|||..:||||..|.|.|.:|..|..
 Worm    61 FNAHYNLTRHMPVHTGERPFVCKVCGKAFRQASTLCRHKIIHTDSKPHKCKTCGKCFNRSSTLNT 125

  Fly   373 HMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYG 437
            |:|.|.|.||:.|..  |||||..:...|.|..||...|.:.|.||.|.|..::.|..|...|..
 Worm   126 HVRIHQGFKPFVCEI--CGKGFHQNGNYKNHRLTHEDTKKFSCSICSRAFHQSYNLAFHMFTHEE 188

  Fly   438 SKCYKCTICDETFKNKKEMEAHIK 461
            .|.:.|.:|.:.|....:::.|::
 Worm   189 HKPFTCHVCSKGFCRNFDLKKHLR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368
COG5048 <270..420 CDD:227381 59/154 (38%)
zf-C2H2 271..293 CDD:278523 2/21 (10%)
C2H2 Zn finger 273..293 CDD:275368 2/19 (11%)
zf-H2C2_2 286..309 CDD:290200 6/27 (22%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
zf-H2C2_2 313..338 CDD:290200 14/24 (58%)
C2H2 Zn finger 329..349 CDD:275368 9/19 (47%)
zf-H2C2_2 344..366 CDD:290200 12/21 (57%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 370..396 CDD:290200 13/25 (52%)
C2H2 Zn finger 385..407 CDD:275368 8/21 (38%)
zf-H2C2_2 400..424 CDD:290200 10/23 (43%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
zf-C2H2 441..463 CDD:278523 4/21 (19%)
C2H2 Zn finger 443..463 CDD:275368 4/19 (21%)
fezf-1NP_502594.2 COG5048 <13..212 CDD:227381 74/210 (35%)
DUF3449 <50..>70 CDD:288759 8/19 (42%)
C2H2 Zn finger 54..74 CDD:275368 8/19 (42%)
zf-H2C2_2 66..91 CDD:290200 14/24 (58%)
C2H2 Zn finger 82..102 CDD:275368 9/19 (47%)
C2H2 Zn finger 110..130 CDD:275368 8/19 (42%)
C2H2 Zn finger 138..158 CDD:275368 8/21 (38%)
C2H2 Zn finger 166..186 CDD:275368 7/19 (37%)
C2H2 Zn finger 194..212 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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