DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and CG11696

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster


Alignment Length:378 Identity:88/378 - (23%)
Similarity:132/378 - (34%) Gaps:91/378 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 PQ-FKCDQCGMTFGSKSAHTSH-TKSHSKNQDLSLNGASGAGVAAPVSTAAIELNDAGLPVGIPK 254
            || |.|..|...|.::::...| .:.||:.|:|                                
  Fly   352 PQYFSCQSCRKNFLNRNSQVMHMLRFHSQQQEL-------------------------------- 384

  Fly   255 SPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTG-ERPFECEFCHKLFSVKENLQVH- 317
                           .:||.:|:..||....|..|.:.|.| |||..|:.|.|.|..|..|..| 
  Fly   385 ---------------VHQCAICEARFAKKFLLTMHLKGHKGTERPEVCDTCSKTFRTKFELSAHV 434

  Fly   318 RRIHTKE-RPYKCDVCGRAFEHSGKLHRHMRIHTGERP---HKCSVCEKTFIQSGQLVIHMRTH- 377
            :|:|..: .|..||:||..|........|.:....:.|   .:|::|.:.......|..|:..| 
  Fly   435 KRMHAADFTPIICDICGTHFRSKANFLIHKKALHPDGPVAEVQCTLCGRWLRDERSLRKHLARHD 499

  Fly   378 --TGEKPYKCPEPGCGKGFTCSKQ------LKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQ 434
              .|:..|:|        ..|:.:      |..|.|.|...|.:.|.:|.::|.....|..|...
  Fly   500 DRDGDTKYRC--------LLCNAEKSSRAALSSHMRYHHSAKRHKCSLCDKEFKLPRALAEHMAT 556

  Fly   435 HYGSKCYKCTICDETFKNKKEMEAHIKG-HANEVPDDEAEAAAASAAASTSAGSSAGSPSLQGVS 498
            |.|...|:|..|..|||:...|..|.|. |    |:|.....:..:::.||..:....|      
  Fly   557 HTGIDLYQCQFCTRTFKSHANMHNHKKKMH----PNDWVRKYSQPSSSITSTAAPLAHP------ 611

  Fly   499 SNSESSNHSPPSSPPATKKPRQARQ--PRVSKTVAATLSIPTSSPLSPSSLSS 549
                  ||....:|||......|..  |.:.....:.:.||.:......|.||
  Fly   612 ------NHPNQPAPPAAAPTNLAGHMLPPLGGIAKSLIEIPDTEGFDFGSNSS 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 4/20 (20%)
COG5048 <270..420 CDD:227381 45/164 (27%)
zf-C2H2 271..293 CDD:278523 7/21 (33%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..309 CDD:290200 10/23 (43%)
C2H2 Zn finger 301..321 CDD:275368 8/20 (40%)
zf-H2C2_2 313..338 CDD:290200 10/26 (38%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
zf-H2C2_2 344..366 CDD:290200 4/24 (17%)
C2H2 Zn finger 357..377 CDD:275368 4/19 (21%)
zf-H2C2_2 370..396 CDD:290200 6/28 (21%)
C2H2 Zn finger 385..407 CDD:275368 5/27 (19%)
zf-H2C2_2 400..424 CDD:290200 8/23 (35%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-C2H2 441..463 CDD:278523 9/22 (41%)
C2H2 Zn finger 443..463 CDD:275368 8/20 (40%)
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368
C2H2 Zn finger 357..378 CDD:275368 4/20 (20%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
C2H2 Zn finger 417..438 CDD:275368 8/20 (40%)
C2H2 Zn finger 447..465 CDD:275368 6/17 (35%)
C2H2 Zn finger 478..498 CDD:275368 4/19 (21%)
C2H2 Zn finger 509..529 CDD:275368 5/27 (19%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 565..583 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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