DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and Zfp672

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001007670.1 Gene:Zfp672 / 303165 RGDID:1359094 Length:468 Species:Rattus norvegicus


Alignment Length:380 Identity:122/380 - (32%)
Similarity:176/380 - (46%) Gaps:51/380 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 FP-ASAAVVSQVRKPSASKPQFKCDQCGMTFGSKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVS 237
            || .||.::.:||:....||. :|..|..:|...:......::|.....::         .||..
  Rat   109 FPHVSALLLHRVRQHPPEKPH-RCPLCARSFRQSALPFHLARAHPPETTIA---------TAPAP 163

  Fly   238 TAAIELNDAGLPVGIPKSPTIKPLANVAA-------GADPYQCNVCQKTFAVPARLIRHYRTHTG 295
            :........  |.....|..::..:.:..       ||:.::|.||.|:|:..:.|.||.:.|:|
  Rat   164 STLYHCTQC--PRAFHSSAGLRNHSRIHVVPSLSDPGAEAHRCGVCGKSFSKSSTLTRHLQRHSG 226

  Fly   296 ERPFECEFCHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVC 360
            |:||:|..|.|.|.....|..|:|.||.|:||.|:.|||.|..|..|.||.|.|.|||||.|:.|
  Rat   227 EKPFKCPECGKGFLESATLVRHQRTHTGEKPYACNDCGRCFSESSTLLRHQRSHQGERPHICATC 291

  Fly   361 EKTFIQSGQLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYN 425
            .|.|.|...||:|.|:||||:|:.|||  ||:|||....|..|.|||||||||||::|.:.|...
  Rat   292 GKGFGQRYDLVVHQRSHTGERPFPCPE--CGRGFTDRSDLTKHLRTHTGEKPYHCELCGKRFTCI 354

  Fly   426 HVLKLHRVQHYGSKCYKCTICDETFKNKKEMEAHIKGHANEVPDDEAEAAAASAAASTSAGSSAG 490
            ..|.:|...|.|.|.:||..|.::|....::..|.|.|..|               .|:..:..|
  Rat   355 SNLNVHLRNHAGHKPHKCPECGKSFSVASKLALHRKTHLGE---------------RTAECTECG 404

  Fly   491 SPSLQGVSSNSESSNHSPPSSPPATKKPRQARQPRVSKTVAATLSIPTSSPLSPS 545
            .....|.|.:....:|            |:||...::.|  .|.::.|...:.||
  Rat   405 KFFSHGRSLSQHQRSH------------RRARAAAMAAT--TTTTVVTEMTIGPS 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 3/19 (16%)
COG5048 <270..420 CDD:227381 77/149 (52%)
zf-C2H2 271..293 CDD:278523 8/21 (38%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..309 CDD:290200 11/22 (50%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zf-H2C2_2 313..338 CDD:290200 13/24 (54%)
C2H2 Zn finger 329..349 CDD:275368 10/19 (53%)
zf-H2C2_2 344..366 CDD:290200 13/21 (62%)
C2H2 Zn finger 357..377 CDD:275368 9/19 (47%)
zf-H2C2_2 370..396 CDD:290200 16/25 (64%)
C2H2 Zn finger 385..407 CDD:275368 11/21 (52%)
zf-H2C2_2 400..424 CDD:290200 15/23 (65%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
zf-C2H2 441..463 CDD:278523 6/21 (29%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
Zfp672NP_001007670.1 COG5048 13..416 CDD:227381 113/335 (34%)
C2H2 Zn finger 17..37 CDD:275368
C2H2 Zn finger 45..65 CDD:275368
C2H2 Zn finger 73..93 CDD:275368
C2H2 Zn finger 102..123 CDD:275368 6/13 (46%)
C2H2 Zn finger 169..189 CDD:275368 2/21 (10%)
C2H2 Zn finger 204..224 CDD:275368 8/19 (42%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
C2H2 Zn finger 260..280 CDD:275368 10/19 (53%)
C2H2 Zn finger 288..308 CDD:275368 9/19 (47%)
C2H2 Zn finger 316..336 CDD:275368 11/21 (52%)
C2H2 Zn finger 344..364 CDD:275368 5/19 (26%)
C2H2 Zn finger 372..392 CDD:275368 5/19 (26%)
C2H2 Zn finger 400..420 CDD:275368 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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