DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kr-h1 and Bcl6

DIOPT Version :9

Sequence 1:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001334955.1 Gene:Bcl6 / 12053 MGIID:107187 Length:707 Species:Mus musculus


Alignment Length:427 Identity:117/427 - (27%)
Similarity:169/427 - (39%) Gaps:97/427 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KSPAKAVAVKKSPAKDSATTKMVYYSANQLLIKTEQSSQAQFCLQVPPPLTATT----------- 87
            :||.|:.....||.:..:       |.|..:::...|          ||..:.|           
Mouse   333 QSPQKSDCQPNSPTESCS-------SKNACILQASGS----------PPAKSPTDPKACNWKKYK 380

  Fly    88 ----TSVGLGVPPSGGQQEHFELLQT---PQQRQMQLQLQDQHQQEQQQFVSYQLAIQQHQKQQQ 145
                .|:.....|.|.:|.....|..   |.....|..::..:           |.:|...|...
Mouse   381 FIVLNSLNQNAKPEGSEQAELGRLSPRAYPAPPACQPPMEPAN-----------LDLQSPTKLSA 434

  Fly   146 QQQHESITNAAPTAAPSAQRIK---TEPVGGFPASAAVVSQVRKPSASKPQFKCDQCGMTFGSKS 207
            ..:..:|        |.|.|:.   ...:.|.|.|:   |:...|....|. ||..||      |
Mouse   435 SGEDSTI--------PQASRLNNLVNRSLAGSPRSS---SESHSPLYMHPP-KCTSCG------S 481

  Fly   208 AHTSHTKSHSKNQDLSLNGASGAGVAAPVSTAAIELNDAGLPVGIPKSPTIKPLANVAAGADPYQ 272
            ....||       ::.|:.| |......:.....|.:|:....|                  .:.
Mouse   482 QSPQHT-------EMCLHTA-GPTFPEEMGETQSEYSDSSCENG------------------TFF 520

  Fly   273 CNVCQKTFAVPARLIRH-YRTHTGERPFECEFCHKLFSVKENLQVHRRIHTKERPYKCDVCGRAF 336
            ||.|...|:..|.|.|| .:||: ::|::|:.|...|..|.||..|:.:||.|:||:|::||..|
Mouse   521 CNECDCRFSEEASLKRHTLQTHS-DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF 584

  Fly   337 EHSGKLHRHMRIHTGERPHKCSVCEKTFIQSGQLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLK 401
            .....|..|.|||:||:|:||..|...|:|...|..|:..|||||||.|..  ||..|...:.||
Mouse   585 NRPANLKTHTRIHSGEKPYKCETCGARFVQVAHLRAHVLIHTGEKPYPCEI--CGTRFRHLQTLK 647

  Fly   402 VHSRTHTGEKPYHCDICFRDFGYNHVLKLHRVQHYGS 438
            .|.|.|||||||||:.|...|.:...|:||..|.:|:
Mouse   648 SHLRIHTGEKPYHCEKCNLHFRHKSQLRLHLRQKHGA 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 6/19 (32%)
COG5048 <270..420 CDD:227381 67/150 (45%)
zf-C2H2 271..293 CDD:278523 8/22 (36%)
C2H2 Zn finger 273..293 CDD:275368 8/20 (40%)
zf-H2C2_2 286..309 CDD:290200 8/23 (35%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
zf-H2C2_2 313..338 CDD:290200 12/24 (50%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
zf-H2C2_2 344..366 CDD:290200 11/21 (52%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
zf-H2C2_2 370..396 CDD:290200 13/25 (52%)
C2H2 Zn finger 385..407 CDD:275368 8/21 (38%)
zf-H2C2_2 400..424 CDD:290200 15/23 (65%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-C2H2 441..463 CDD:278523
C2H2 Zn finger 443..463 CDD:275368
Bcl6NP_001334955.1 BTB_POZ_ZBTB27_BCL6 8..125 CDD:349640
PHA03247 <179..429 CDD:223021 20/123 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..350 5/16 (31%)
Required for interaction with NuRD complex and for transcriptional repressor activity 377..380 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..469 13/85 (15%)
C2H2 Zn finger 521..542 CDD:275368 8/20 (40%)
C2H2 Zn finger 549..569 CDD:275368 7/19 (37%)
zf-H2C2_2 561..586 CDD:372612 12/24 (50%)
C2H2 Zn finger 577..597 CDD:275368 7/19 (37%)
zf-H2C2_2 589..614 CDD:372612 12/24 (50%)
C2H2 Zn finger 605..625 CDD:275368 6/19 (32%)
zf-H2C2_2 617..642 CDD:372612 13/26 (50%)
C2H2 Zn finger 633..653 CDD:275368 8/21 (38%)
zf-H2C2_2 646..670 CDD:372612 15/23 (65%)
C2H2 Zn finger 661..679 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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