DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kr-h2 and tmem33

DIOPT Version :10

Sequence 1:NP_523490.1 Gene:Kr-h2 / 33859 FlyBaseID:FBgn0266449 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_998828.1 Gene:tmem33 / 327214 ZFINID:ZDB-GENE-030131-5425 Length:252 Species:Danio rerio


Alignment Length:255 Identity:104/255 - (40%)
Similarity:149/255 - (58%) Gaps:12/255 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NSSERSSQQQEQPQQSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSA-- 79
            ::.:||......||        |...|...:|::::|:|..||..::.::.::||:...|.:|  
Zfish     3 DTEQRSPPPPPPPQ--------AGAAQFLLSNKLETAMWLSRLFTVYCSIMFILPLLGPQAAANF 59

  Fly    80 FSKVMLANAAISALRLHQRLPAFAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIPVLLYS 144
            :.:.:||||..||||||||||.|..||.|||:...||||||::||||..|..|..:.:.||.|:|
Zfish    60 YQRALLANALTSALRLHQRLPHFQLSRAFLAQALQEDSCHYLLYSLILVNSYPITMSIFPVFLFS 124

  Fly   145 VLHASSYSLKLLDLIGQNSWWGARFIISIVEFQAANILKATAFCEIFIMPYAIVLAFMNHAGLMT 209
            :|||::|:.|:||.:|.||....|..::.:.....||||..|..|||:||..:.:.|.....|:.
Zfish   125 LLHATTYTKKVLDTMGPNSLMFVRNFLNKLTSNQQNILKFIACNEIFLMPATVFMLFSGQGSLLQ 189

  Fly   210 PVIYYHYLVMRYSSRRNPYPRNAFAELRITFE--ALAARSPPAFAKIIRGGIGFVNRLAP 267
            |.|||.:|.:|||||||||.|..|.||||..|  .:....|..|.::....|.||:||||
Zfish   190 PFIYYRFLTLRYSSRRNPYCRTLFTELRILLEHFVMKPSCPVFFRRMCLNSIAFVSRLAP 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kr-h2NP_523490.1 TMEM33_Pom33 39..268 CDD:461009 100/233 (43%)
tmem33NP_998828.1 TMEM33_Pom33 16..250 CDD:461009 101/242 (42%)

Return to query results.
Submit another query.