DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pfdn1 and Pfdn1

DIOPT Version :10

Sequence 1:NP_608992.1 Gene:Pfdn1 / 33857 FlyBaseID:FBgn0031776 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_080303.1 Gene:Pfdn1 / 67199 MGIID:1914449 Length:122 Species:Mus musculus


Alignment Length:118 Identity:42/118 - (35%)
Similarity:77/118 - (65%) Gaps:0/118 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQMDIELKKAFTEMQINKLETTKKIHMIDMKCDMVKTGKQKYQLTEKGTSSLADDTRVYQSVGRM 66
            |.:|:||||||||:|...::|.:|:.:.|::.:.:...|:...||:....:|.|:|.:|:.||||
Mouse     3 ASVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRM 67

  Fly    67 FLLTDVQNMREDLKARQEKCDKAIELLEKKKEFLQKSLKSQEDGLRELVQQRK 119
            |:|...:.:...|..:|:..::.|:.||:||.:|::|:|..||.:||::..|:
Mouse    68 FILQSKEVIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pfdn1NP_608992.1 Prefoldin_1 14..112 CDD:467480 30/97 (31%)
coiled coil 14..53 CDD:467480 8/38 (21%)
coiled coil 73..112 CDD:467480 12/38 (32%)
Pfdn1NP_080303.1 Prefoldin_1 15..113 CDD:467480 30/97 (31%)
coiled coil 15..54 CDD:467480 8/38 (21%)
coiled coil 74..113 CDD:467480 12/38 (32%)

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