DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pfdn1 and pfdn1

DIOPT Version :10

Sequence 1:NP_608992.1 Gene:Pfdn1 / 33857 FlyBaseID:FBgn0031776 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_001013362.1 Gene:pfdn1 / 503766 ZFINID:ZDB-GENE-050306-50 Length:122 Species:Danio rerio


Alignment Length:118 Identity:41/118 - (34%)
Similarity:73/118 - (61%) Gaps:0/118 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQMDIELKKAFTEMQINKLETTKKIHMIDMKCDMVKTGKQKYQLTEKGTSSLADDTRVYQSVGRM 66
            |.:|:||||||.|:|...::|.:|:.:.|::.:.:...|:...||....:||.:.||:::..|||
Zfish     3 APVDLELKKAFAELQAKMVDTQQKVKLADLQIEQLSRVKKHANLTHGEITSLPESTRMFEGAGRM 67

  Fly    67 FLLTDVQNMREDLKARQEKCDKAIELLEKKKEFLQKSLKSQEDGLRELVQQRK 119
            |:|.....:...|..:|:..|..|:.||:||.:|::|:|..||.:||::..|:
Zfish    68 FILQSKGEISNQLLEKQKTADDKIKELEQKKTYLERSVKDAEDNIREMLMSRR 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pfdn1NP_608992.1 Prefoldin_1 14..112 CDD:467480 30/97 (31%)
coiled coil 14..53 CDD:467480 8/38 (21%)
coiled coil 73..112 CDD:467480 13/38 (34%)
pfdn1NP_001013362.1 Prefoldin_1 15..113 CDD:467480 30/97 (31%)
coiled coil 15..54 CDD:467480 8/38 (21%)
coiled coil 74..113 CDD:467480 13/38 (34%)

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