DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9150 and rdh8b

DIOPT Version :10

Sequence 1:NP_608991.2 Gene:CG9150 / 33856 FlyBaseID:FBgn0031775 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_957082.2 Gene:rdh8b / 393761 ZFINID:ZDB-GENE-040426-1759 Length:317 Species:Danio rerio


Alignment Length:253 Identity:70/253 - (27%)
Similarity:116/253 - (45%) Gaps:46/253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KLAVVTGASGGIGAACA---------RAMIGAGLRVVGLARREAKLKELRESLPRELQANFIPRR 62
            |:.::||.|.|||...|         |..:.|.:|  .|.|::..:....::..:.|..      
Zfish     7 KVVLITGCSSGIGLGIAVMLARDKQQRYYVIATMR--DLKRQDKLVCAAGDTYGKTLTV------ 63

  Fly    63 C--DVSKEDQVQSSFDWI-ERELEGADVLLNNAGITRETELVTP---SNTQKLKEVIDTNVMGVI 121
            |  ||...:.|:...|.: :|.:   |:|:||||:    .||.|   .:...:.:|.:||..|.:
Zfish    64 CTLDVCSNESVRQCVDSVKDRHI---DILINNAGV----GLVGPVEGLSLDDMMKVFETNFFGAV 121

  Fly   122 WCTREAFNNMKRRGGEGHVLIINSIAGHQVLNFIDVLPSFNIYPATKFAITAITETYRQEFQLHS 186
            ...:|...:||:| ..||:::|:|:.|.|.:.|.||      |.|:||||....|:.  ..||..
Zfish   122 RMIKEVMPDMKKR-RSGHIIVISSVMGLQGVAFNDV------YAASKFAIEGFCESL--AVQLLK 177

  Fly   187 NKIRVTGICPGAVNTNIFPEEIHFYVKDMARLEPANIADAVMYALRT---PPHVQVHE 241
            ..:.::.|.||.|:|..   |:..| .|:::.|..|.....|:..||   |..|.:.:
Zfish   178 FNVTMSMIEPGPVHTEF---EMKMY-DDVSKKEYPNTDPETMHHFRTCYLPTSVNIFQ 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9150NP_608991.2 Rossmann-fold NAD(P)(+)-binding proteins 1..247 CDD:473865 70/253 (28%)
rdh8bNP_957082.2 type1_17beta-HSD-like_SDR_c 7..264 CDD:187666 70/253 (28%)

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