DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbw5 and pof10

DIOPT Version :9

Sequence 1:NP_608989.1 Gene:Fbw5 / 33854 FlyBaseID:FBgn0031773 Length:656 Species:Drosophila melanogaster
Sequence 2:NP_596201.1 Gene:pof10 / 2539767 PomBaseID:SPBC1703.06 Length:662 Species:Schizosaccharomyces pombe


Alignment Length:584 Identity:120/584 - (20%)
Similarity:186/584 - (31%) Gaps:191/584 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPEPALLMIFERLSVPDLLRASRCCVRWHSIAKDDLLWRHKFQEHFKASPSIPLKP-GSESWRAE 102
            ||:..|::||..|....||.|...|..|..:..|||.||..|..||....|....| |:.:||.|
pombe    34 LPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRTAFFHHFAGDQSQIFSPLGNGTWRQE 98

  Fly   103 YKRLSMHIPFVQAQRLEPTV----ENNHGHTHQ-------------------------------- 131
            |             .|..|:    |...|.|.|                                
pombe    99 Y-------------LLRSTITRAYEKGKGQTVQYDCRVGQLTNLYYDFSSGRLYSGNWLTGTISV 150

  Fly   132 -----------VLHV----SFAH-------NGEMFATCSKDGY--VIIWNAQHPCSEKYAHNMKQ 172
                       :||.    ||.|       ..::|.....||.  ||:.:.|.....|:      
pombe   151 SDPTTGKVERSLLHASTDGSFTHGLSTMTLGKQIFGFGFMDGRVGVILMSRQAETPRKF------ 209

  Fly   173 FSWKYSQYSQFNQSDTLLLVSGVHFGSPQSTSGEIAVFYLGATESHLRCRVVNRPYDIFGTWFSD 237
                  :|...:.:|::..:..:....|  .:|||.: ..|:.:..:.|..|.....:....|..
pombe   210 ------RYCLDSHADSVTCIDALTGDLP--PTGEIGM-VTGSDDGSVHCWDVKTGVSLQSFQFRS 265

  Fly   238 QYLISGDLHWLAHLVSTSVLWLNKANQEIDSEHVPIMSQLYKF--YNRNASSVRAIMVA--RCPW 298
            ..::|     |.......:|.::..|.|::|      .|||..  |.|:..:.:.|:::  :|..
pombe   266 SQILS-----LCFRPKYKMLLVDTFNYELNS------YQLYLIPGYARSRKNEQPILLSSRKCVL 319

  Fly   299 LDESNDPLATTADQESHSSVLS--------------------PPTGDQGSTSQASGNPVSHAASI 343
            .||...|...|||..:..:.||                    ...|.|.|:...:|.|.|.:   
pombe   320 TDEEEPPCLMTADCCAGVAFLSRGAPKNCICRVSFKEFLEKNDNVGVQTSSIPLNGKPTSIS--- 381

  Fly   344 LRTR-----SSTP----------EENYLPDI----SERRSRARLGDATIH--------YLDEYRT 381
            |.|.     .|||          :||.|..:    :|..::|.|...|.:        ||:|...
pombe   382 LDTNDRVLSKSTPGRGARLLAVGDENGLVYVVNTRTEDPNKAILRTITAYSNFPITDIYLNEVAM 446

  Fly   382 AVATTNESNDDDDEEYDSMDVQEEYDEMENSIPKYLIFSTGSTTFTPHQIGFKRIRNVFFPKKLD 446
            .|.:.:        .|..:     ||.:..:..|.:..:..:....|       |..:.    ||
pombe   447 VVGSAS--------GYCGV-----YDTVTGNFLKKIASARNAARREP-------INCIL----LD 487

  Fly   447 PGP-SLKERIAAKRAAEQQQQQTPRTDPDWWDYESVKDRFDKVDKVIDLHGHIIGMALSPDHRY 509
            ..| |||..|...:..:.            |.|...|...:|..||:.|...:....||....|
pombe   488 SNPLSLKGVITMSKHVKS------------WSYTIPKPFVNKRSKVLPLRPSVTHDNLSKSSDY 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbw5NP_608989.1 F-box-like 36..82 CDD:289689 17/42 (40%)
WD40 126..157 CDD:197651 13/86 (15%)
WD40 repeat 132..176 CDD:293791 12/56 (21%)
WD40 <538..>644 CDD:225201
WD40 <553..>637 CDD:295369
WD40 repeat 566..600 CDD:293791
pof10NP_596201.1 F-box-like 31..77 CDD:289689 17/42 (40%)
WD40 124..507 CDD:225201 78/447 (17%)
WD40 repeat 127..166 CDD:293791 2/38 (5%)
WD40 repeat 171..210 CDD:293791 9/50 (18%)
WD40 <208..>282 CDD:295369 14/93 (15%)
WD40 repeat 221..262 CDD:293791 7/43 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5529
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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