DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-51 and Ndufv1

DIOPT Version :9

Sequence 1:NP_001285657.1 Gene:ND-51 / 33852 FlyBaseID:FBgn0031771 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001006973.1 Gene:Ndufv1 / 293655 RGDID:1359247 Length:464 Species:Rattus norvegicus


Alignment Length:454 Identity:369/454 - (81%)
Similarity:405/454 - (89%) Gaps:8/454 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TLPASLHVQRFQSTQAPPPGTPPPQTKTKFGPLADEDRIFTNLYGRHDWRLKGALKRGDWYKTKE 82
            ::|..:.|:....|.||        .||.||.|.||||||||||||||||||||.:|||||||||
  Rat    11 SVPVRVSVRLSSGTTAP--------KKTSFGSLKDEDRIFTNLYGRHDWRLKGAQRRGDWYKTKE 67

  Fly    83 IVLKGADWIVNEIKTSGLRGRGGAGFPSGMKWSFMNKPGDGRPKYLVVNADEGEPGTCKDREIMR 147
            |:|||.|||:.|:||||||||||||||:|:||||||||.||||||||||||||||||||||||||
  Rat    68 ILLKGPDWILGEMKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMR 132

  Fly   148 HDPHKLVEGCLIAGRAMGAQAAYIYIRGEFYNEASNMQLAIAEAYQAGLIGKNACGTGYDFDVFM 212
            |||||||||||:.||||||:||||||||||||||||:|:||.|||:|||||||||.:.||||||:
  Rat   133 HDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACDSDYDFDVFV 197

  Fly   213 HRGAGAYICGEETALIESLEGKQGKPRLKPPFPADVGVFGCPTTVTNVETVAVAPTICRRGGVWF 277
            .|||||||||||||||||:||||||||||||||||||||||||||.|||||||:||||||||.||
  Rat   198 VRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWF 262

  Fly   278 ASFGRTRNSGTKLFNISGHVNRPCTVEEEMSIPLKELIERHCGGVTGGWDNLLGVIPGGSSTPII 342
            |.|||.|||||||||||||||.|||||||||:|||||||:|.|||.|||||||.|||||||||:|
  Rat   263 AGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVLGGWDNLLAVIPGGSSTPLI 327

  Fly   343 PKNVCDDVIMDFDGLIAAQTSLGTAAIIVMDKSTDVIKAIARLISFYKHESCGQCTPCREGIGWM 407
            ||:||:.|:||||.|:.|||.|||||:|||:.|||::|||||||.||||||||||||||||:.||
  Rat   328 PKSVCETVLMDFDALVQAQTGLGTAAVIVMNSSTDIVKAIARLIEFYKHESCGQCTPCREGVDWM 392

  Fly   408 NKIMTRFVKGDAQPAEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPEIEKRMQLHAKR 471
            ||:|.|||||||:|||||.||||||||||||||||||||||||||||||||||:|.|||..|::
  Rat   393 NKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQRFAQQ 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-51NP_001285657.1 PRK13596 50..474 CDD:237441 360/422 (85%)
Complex1_51K 95..264 CDD:279808 150/168 (89%)
SLBB 290..342 CDD:287499 45/51 (88%)
NADH_4Fe-4S 381..462 CDD:287548 73/80 (91%)
Ndufv1NP_001006973.1 PRK13596 35..453 CDD:237441 359/417 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353748
Domainoid 1 1.000 327 1.000 Domainoid score I1142
eggNOG 1 0.900 - - E1_COG1894
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5151
Inparanoid 1 1.050 789 1.000 Inparanoid score I490
OMA 1 1.010 - - QHG54201
OrthoDB 1 1.010 - - D272111at33208
OrthoFinder 1 1.000 - - FOG0003103
OrthoInspector 1 1.000 - - oto96953
orthoMCL 1 0.900 - - OOG6_101044
Panther 1 1.100 - - LDO PTHR11780
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2074
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

Return to query results.
Submit another query.