DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and RCCD1

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_291022.2 Gene:RCCD1 / 91433 HGNCID:30457 Length:376 Species:Homo sapiens


Alignment Length:351 Identity:78/351 - (22%)
Similarity:127/351 - (36%) Gaps:125/351 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EDLLATLEKTPG----------QMLIAGMVTW------DLTGKRD----------------RKNV 98
            |.|||.|...||          :..:.|...|      :..|:.|                |..|
Human    80 EGLLAVLRAGPGPEALLQVWAAESALRGEPLWAQNVVPEAEGEDDPAGEAQAGRLPLLPCARAYV 144

  Fly    99 TKVRPNLYSFHR--FTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLG---LSQDIKLAE 158
            :...|    |:|  ..|.:.|.:..|  |.|.:|::...:...:|....||||   |..::    
Human   145 SPRAP----FYRPLAPELRARQLELG--AEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEL---- 199

  Fly   159 KPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGV--------GNTHANIYSPTP 215
            :|.::.||:.|.:.:.|.|..|::.:::||.:|..|.|:|||..:        |.|.|.  ..|.
Human   200 EPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAR--EATE 262

  Fly   216 INYRGPPIIRIGCGAE------------FSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKL 268
            :|..|..:.|.| |||            |..:||:                              
Human   263 LNEDGSQVKRTG-GAEDGAPAPFIAVQPFPALLDL------------------------------ 296

  Fly   269 SFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAE 333
                                    |: |...|..:||:.||..:.....:|:||:|.:|:|||.:
Human   297 ------------------------PM-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHED 336

  Fly   334 PKDEMVPRLMKFFDTQGRGGRSVFCG 359
            ......||.:::|..:....::|.||
Human   337 TTSLDRPRRVEYFVDKQLQVKAVTCG 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 60/264 (23%)
RCCD1NP_291022.2 Interaction with KDM8. /evidence=ECO:0000269|PubMed:24981860 1..169 20/94 (21%)
ATS1 <160..368 CDD:444065 61/267 (23%)
RCC1 2 176..227 13/54 (24%)
RCC1 3 229..317 28/145 (19%)
RCC1 4 318..371 14/45 (31%)

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