DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and HERC1

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_016878188.1 Gene:HERC1 / 8925 HGNCID:4867 Length:4909 Species:Homo sapiens


Alignment Length:449 Identity:121/449 - (26%)
Similarity:194/449 - (43%) Gaps:90/449 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 DLDPPSKLPEDLLATLEKTPGQMLIAGM------------VTWDLTGKRDRKNVTKVRPNLYSF- 108
            ||:|   :|||.|..|  ......|.||            ..|.|.||.|          :|.: 
Human  4002 DLEP---VPEDELVFL--MDNSKWINGMDEQIMSWATSRPEDWHLGGKCD----------VYLWG 4051

  Fly   109 ---HRFTEEKYRYV---ASGPSAAH----------TILINMDRKALGFGRNPSGQLGL--SQDIK 155
               |....|..|.|   |:.||.:.          |.:|..:...|..|....|:||.  |.|:.
Human  4052 AGRHGQLAEAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLH 4116

  Fly   156 LAEKPTIIPALEQLNIVQAAV---GRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN 217
            :.   |:|.||:...:.|...   ...|::.||::|.|::.|:...|:.|.||:... ..|..|.
Human  4117 VL---TVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIE 4177

  Fly   218 -YRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVL 281
             .:|..::::.||.:.|.::...|.|.|||..:||:||..                .||.||:  
Human  4178 ALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG----------------NTSNKKL-- 4224

  Fly   282 YIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSK-KRVYSWGFGGFGRLGHAEPKDEMVPRLMKF 345
                  ...||.::|.||...|||.|||:|:.:. ..|:::|.|.:|:||......:..|:  |.
Human  4225 ------PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQ--KI 4281

  Fly   346 FDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK----KTGEANMYPKPVQ--DLSGWNITDIGC 404
            ....|.|.:.|.||:.||:.:.:.|.::.|||::    ..|.|..:.:|.|  .|:|..|.|:..
Human  4282 DVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAV 4346

  Fly   405 -ANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHT 462
             |..::.::::..:.||| |.:.|:||:|. ......|..|..|....:.|::.|..|:
Human  4347 GAEHTLALASNGDVYAWG-SNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 12/49 (24%)
RCC1_2 171..200 CDD:290274 7/31 (23%)
RCC1 188..236 CDD:278826 13/48 (27%)
RCC1 239..312 CDD:278826 24/72 (33%)
RCC1 317..366 CDD:278826 15/48 (31%)
RCC1 414..465 CDD:278826 14/49 (29%)
HERC1XP_016878188.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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