DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and FMP25

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_013178.1 Gene:FMP25 / 850766 SGDID:S000004067 Length:583 Species:Saccharomyces cerevisiae


Alignment Length:472 Identity:95/472 - (20%)
Similarity:149/472 - (31%) Gaps:181/472 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DYEDEFS-DES------DDDGVQQQAAAANQMEVLIPHDDLDPPSKLPEDLLATLEKTPGQMLIA 82
            |:...|: ||.      ||.|         |.:.::|..|| ...|.....|..|.| .|::|:.
Yeast   197 DFNTNFAIDEKGDLISWDDLG---------QTKTILPDQDL-TSMKYSSHFLYALNK-KGEILVI 250

  Fly    83 GMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQ 147
            .:.|.||...:.....:|:.|        .:.|.||                             
Yeast   251 PIRTPDLIASQVSSRRSKLLP--------WKTKLRY----------------------------- 278

  Fly   148 LGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYAC---GENKSGQCGVGNTHAN 209
                 |.||...........:..:||...|.||.:.|::.|..|.|   .:.|..|...|.    
Yeast   279 -----DWKLQTNQIFNGKEGEKRVVQFDAGSHHLVLLSNLGKAYCCATGNDQKQAQVSKGQ---- 334

  Fly   210 IYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFET 274
                                               ||:|.:.|...      |...|:|   || 
Yeast   335 -----------------------------------FGIPTFSQFDE------FPPNNQL---FE- 354

  Fly   275 SPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMV 339
                 :..:.|.|......|...:|...|||:.||:|||....:|::|:..||:|.        :
Yeast   355 -----IELLNKFKHEGEDVVRKREIKKIACGSYHTLAIDKTGEIYAFGWNRFGQLA--------L 406

  Fly   340 PRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPV--------QDLSG 396
            |                   .:::|                  |...:|:.|        ..::.
Yeast   407 P-------------------ISYNL------------------EYVSFPRSVTHAFKPHFPGMTN 434

  Fly   397 WNITDIGCANTSIMI-------SADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQ 454
            |...||.|.:.:..:       ::|....|:| :..|||||...|:.|...|.:: |.|:.|:..
Yeast   435 WKCVDIHCDDETSFVTIRKPGSTSDHHYFAFG-NGLFGELGNNTFKNSQCDPIKI-KSDDKKLTN 497

  Fly   455 VTMGYSHTVLLVDTTHE 471
            .:.| ||.| ..:|..|
Yeast   498 WSCG-SHCV-FTETEQE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 8/44 (18%)
RCC1_2 171..200 CDD:290274 10/31 (32%)
RCC1 188..236 CDD:278826 6/50 (12%)
RCC1 239..312 CDD:278826 18/72 (25%)
RCC1 317..366 CDD:278826 7/48 (15%)
RCC1 414..465 CDD:278826 18/50 (36%)
FMP25NP_013178.1 ATS1 8..577 CDD:227511 95/472 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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