DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT1G65920

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_176767.1 Gene:AT1G65920 / 842904 AraportID:AT1G65920 Length:1006 Species:Arabidopsis thaliana


Alignment Length:475 Identity:105/475 - (22%)
Similarity:198/475 - (41%) Gaps:89/475 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ESDYEDEFSDESDDDGVQ------QQAAAANQMEVLIPHDDLDPPSKLPEDLLATLEKTPGQMLI 81
            |:||:...||.....|.:      |:.||:..:.::     ..|         .|.......::|
plant   213 ETDYDFRNSDCDRSTGSELCRFSSQRFAASPPLSII-----TQP---------VTRSNVLKDIMI 263

  Fly    82 AGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSG 146
            .|.:|..:.|.:::.:.  :.|.|  ....|....:.::.|  |.|..|:....:...:|...||
plant   264 WGAITGLIDGSKNQNDA--LSPKL--LESATMFDVQSISLG--AKHAALVTRQGEVFCWGNGNSG 322

  Fly   147 QLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGEN-----KSGQCGVGNT 206
            :|||..:|.: :.|..:.:||.:.:...|...|.|..:|::|.:|..|.:     :||...:...
plant   323 KLGLKVNIDI-DHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRK 386

  Fly   207 HANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFH 271
            .:::...:      ..::.:.|||..:.|:...|.|.|:|...:|.|||.            |..
plant   387 ISDVLGGS------LTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHG------------SLE 433

  Fly   272 FETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAI-----DSK-------KRVYSWGFG 324
            ..|.||:|    |..:.        ::::..:||..||.||     |.|       .::::||.|
plant   434 SVTKPKEV----ESLRR--------MKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDG 486

  Fly   325 GFGRLGHAEPKDEMVPR-LMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQ--NKKTGEANM 386
            ..||||||:.|.::||. :.:..|   .....|.||.|.::.::..|.::..|.  :.:.|....
plant   487 DKGRLGHADSKRKLVPTCVTELID---HDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRA 548

  Fly   387 YPKPVQDLSGWNIT-----DIGCANTSI-MISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVP 445
            ..|.|..:.| |:|     ||...:..: ::::...:..||.... |:||:|:.:..:: |..|.
plant   549 KDKSVNVVLG-NLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMN-GQLGLGDVRDRNS-PVLVE 610

  Fly   446 KLDNIKIPQVTMGYSHTVLL 465
            .|.:..:..:..|.:.|..:
plant   611 PLGDRLVESIACGLNLTAAI 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 13/44 (30%)
RCC1_2 171..200 CDD:290274 8/33 (24%)
RCC1 188..236 CDD:278826 8/52 (15%)
RCC1 239..312 CDD:278826 18/72 (25%)
RCC1 317..366 CDD:278826 17/49 (35%)
RCC1 414..465 CDD:278826 11/50 (22%)
AT1G65920NP_176767.1 PH_PLC_plant-like 14..126 CDD:270171
ATS1 <291..646 CDD:227511 87/379 (23%)
FYVE 639..699 CDD:366594
Smc <798..>864 CDD:224117
BRX_N 839..874 CDD:372684
BRX 948..1001 CDD:369842
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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