DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT1G27060

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_174026.1 Gene:AT1G27060 / 839595 AraportID:AT1G27060 Length:386 Species:Arabidopsis thaliana


Alignment Length:371 Identity:88/371 - (23%)
Similarity:134/371 - (36%) Gaps:104/371 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 TWDLTGKRDRKNVTKVR----PNLYSFHRFTEEKYRYVASGPS-------AAHTILINMDRKALG 139
            :|. .|...:...||::    |.|.|           :.|.||       .||.|.:....|...
plant    19 SWG-AGTDGQLGTTKLQDELLPQLLS-----------LTSLPSISMLACGGAHVIALTSGGKVFT 71

  Fly   140 FGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVG 204
            :||..||||| ..||.....|.::...:...|.|||.|..|:.|::|:|.::.||....||.|.|
plant    72 WGRGSSGQLG-HGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHG 135

  Fly   205 NTHANIYSPTPI-NYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVN---- 264
            :| .::.:|..: ::....:..:.||...|::|.....:..||..:.||||.::|....||    
plant   136 DT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCV 199

  Fly   265 -------------AN-------------------------------------------------- 266
                         ||                                                  
plant   200 VSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALL 264

  Fly   267 --------KLSFHFETSPKKVVLYIEKSKE--GHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSW 321
                    ||.......|:|..|.|:.|:.  ..|...|||:::..|.|..|:.|:.....|.:|
plant   265 LTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTW 329

  Fly   322 GFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGR-SVFCGSTFSLIV 366
            |:|..|:||.....|:..|.|:.......|... .|:|||.|:..|
plant   330 GWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVYCGSGFTYAV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 16/44 (36%)
RCC1_2 171..200 CDD:290274 11/28 (39%)
RCC1 188..236 CDD:278826 12/48 (25%)
RCC1 239..312 CDD:278826 25/149 (17%)
RCC1 317..366 CDD:278826 16/49 (33%)
RCC1 414..465 CDD:278826
AT1G27060NP_174026.1 ATS1 17..379 CDD:227511 88/371 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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