DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT5G42140

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001318728.1 Gene:AT5G42140 / 834219 AraportID:AT5G42140 Length:1078 Species:Arabidopsis thaliana


Alignment Length:375 Identity:87/375 - (23%)
Similarity:152/375 - (40%) Gaps:64/375 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 YVASGPSAAHTILINMDRKALGFGRNPSGQL--GLSQDIKLAEKPTIIPALEQLNIVQAAVGRHH 180
            ::|.|  ..|..|::...:...:|....|:|  |:.:|:   ..|.:|.:|...:|...|.|..|
plant   281 HIACG--VKHAALVSRQGEVFTWGEASGGRLGHGMGKDV---TGPQLIESLAATSIDFVACGEFH 340

  Fly   181 TLFLTDTGTVYACGE--NKSGQCGVGNTHANIYSPTPIN--YRGPPIIRIGCGAEFSVILDIKGS 241
            |..:|.||.:|..|:  :.:|..|.| |..:.:.|..|:  ..|..|..:.||...:.::...|.
plant   341 TCAVTMTGEIYTWGDGTHNAGLLGHG-TDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQ 404

  Fly   242 LHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGN 306
            |.|||...:|.|||                   ..|:.|.|..:     |..:.|::.:..|||.
plant   405 LFTFGDGTFGVLGH-------------------GDKETVFYPRE-----VESLSGLRTIAVACGV 445

  Fly   307 NHTVAI-----------DSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFF--DTQGRGGRSVFC 358
            .|..||           .|..::::||.|...||||.:.:..:.|..:...  .|..|    |.|
plant   446 WHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHR----VAC 506

  Fly   359 GSTFSLIVNELGLLF-----LFGQNKKTGEANMYPKPVQD-LSGWNITDIGCA--NTSIMISADD 415
            |.:.::.:...|.::     ::||..........|..|:| |:...:.:|.|.  :.:::.|.::
plant   507 GHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNE 571

  Fly   416 TLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLL 465
             :..||.... |.||.|:.: ....|..|..|....:..:..|.:.|..:
plant   572 -VFTWGKGAN-GRLGHGDVE-DRKAPTLVDALKERHVKNIACGSNFTAAI 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 13/46 (28%)
RCC1_2 171..200 CDD:290274 10/30 (33%)
RCC1 188..236 CDD:278826 13/51 (25%)
RCC1 239..312 CDD:278826 18/72 (25%)
RCC1 317..366 CDD:278826 13/50 (26%)
RCC1 414..465 CDD:278826 11/50 (22%)
AT5G42140NP_001318728.1 PH_PLC_plant-like 12..124 CDD:270171
ATS1 <282..614 CDD:227511 86/368 (23%)
FYVE 621..689 CDD:214499
BRX_N 869..904 CDD:372684
BRX 1003..1057 CDD:369842
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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