DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and RUG1

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_680156.2 Gene:RUG1 / 830771 AraportID:AT5G08710 Length:434 Species:Arabidopsis thaliana


Alignment Length:350 Identity:98/350 - (28%)
Similarity:147/350 - (42%) Gaps:46/350 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 RKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSG 199
            |.|..:|....|:|||. ::.....|.:..||...:|...|.|..||||||:|..|:|.|.|..|
plant    49 RFAAMWGSGDYGRLGLG-NLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCG 112

  Fly   200 QCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVN 264
            |.||.:..::...|..::.....|:.|..|...|..:.:.|.|:.:|....||||....|...|.
plant   113 QLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVR 177

  Fly   265 ANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRL 329
            .          |.|            |..:.|:.|...|.|:.|:||:.....|.|||.||.|||
plant   178 V----------PTK------------VEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRL 220

  Fly   330 GHA---------EPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQN--KKTGE 383
            ||.         ....|..|||:|  :.:|....:|..|...|...:|.|..|:||:.  .|.|.
plant   221 GHGHQSSLFGILRSNSEFTPRLIK--ELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGF 283

  Fly   384 ANM----YPKPVQDLSGWNITDIGCAN-TSIMISADDTLIAWGASPTFGELGI-GEFQKSSTVPK 442
            ..:    .|..:.::.  ...::.|.. .:.:::....|..||::.. |.||. ..:...|.|..
plant   284 GGVRNATTPSIISEVP--YAEEVACGGYHTCVVTRGGELYTWGSNEN-GCLGTDSTYVSHSPVRV 345

  Fly   443 EVPKLDNIKIPQVTMGYSHTVLLVD 467
            |.|.|:: .:.||:.|:.||..:.|
plant   346 EGPFLES-TVSQVSCGWKHTAAISD 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 14/44 (32%)
RCC1_2 171..200 CDD:290274 14/28 (50%)
RCC1 188..236 CDD:278826 13/47 (28%)
RCC1 239..312 CDD:278826 18/72 (25%)
RCC1 317..366 CDD:278826 20/57 (35%)
RCC1 414..465 CDD:278826 16/51 (31%)
RUG1NP_680156.2 RCC1 54..97 CDD:395335 14/43 (33%)
ATS1 93..432 CDD:227511 84/304 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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