DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT3G53830

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001327553.1 Gene:AT3G53830 / 824550 AraportID:AT3G53830 Length:500 Species:Arabidopsis thaliana


Alignment Length:350 Identity:91/350 - (26%)
Similarity:139/350 - (39%) Gaps:98/350 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLF 183
            ||:|  ..||:.::...:..|:|....|||||...||:...|.:||.||.:     ..|:..:..
plant   247 VATG--GRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESI-----GSGKERSFI 304

  Fly   184 LTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLP 248
            |...||.     ..|.|.          |..|..|    |..|.||...|..:...|.|.|||..
plant   305 LHQGGTT-----TTSAQA----------SREPGQY----IKAISCGGRHSAAITDAGGLITFGWG 350

  Fly   249 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAID 313
            .|||.||.       |.|                 ::.:...|:.|..|::...|.|..||:.|.
plant   351 LYGQCGHG-------NTN-----------------DQLRPMAVSEVKSVRMESVAAGLWHTICIS 391

  Fly   314 SKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQN 378
            |..:||::|...||:||......|::|||:...:.:|:..::|.||:..|.::.|.|.|..:|.|
plant   392 SDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWN 456

  Fly   379 KKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKE 443
            |                                              :|:||:|: .....:|.:
plant   457 K----------------------------------------------YGQLGLGD-TNDRNIPTQ 474

  Fly   444 VPKLDNIKIPQVTMGYSHTVLLVDT 468
            | :||..::.:|..|:.||:||.|:
plant   475 V-QLDGCRLRKVACGWWHTLLLGDS 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 15/44 (34%)
RCC1_2 171..200 CDD:290274 5/28 (18%)
RCC1 188..236 CDD:278826 12/47 (26%)
RCC1 239..312 CDD:278826 19/72 (26%)
RCC1 317..366 CDD:278826 16/48 (33%)
RCC1 414..465 CDD:278826 12/50 (24%)
AT3G53830NP_001327553.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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