DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT3G47660

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001325559.1 Gene:AT3G47660 / 823920 AraportID:AT3G47660 Length:990 Species:Arabidopsis thaliana


Alignment Length:352 Identity:77/352 - (21%)
Similarity:152/352 - (43%) Gaps:43/352 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVY 191
            :.:|:....:...:|....|:||... ......|.:|.......:..|..|..||..:|.:|.:|
plant   346 YAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLY 409

  Fly   192 AC--GENKSGQCGVGNTHANIYSPTPI--NYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQ 252
            |.  |::.:|..|:| :.|:.:.|..|  ...|..:..|.||...:..:..:|.|.|||...:|.
plant   410 AWGDGDHNAGLLGLG-SGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGA 473

  Fly   253 LGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAI----- 312
            |||         .:::|.:.   |::            |..::|.:.:..|||..|:.|:     
plant   474 LGH---------GDRISTNI---PRE------------VEALNGCRTIKAACGVWHSAAVVSVFG 514

  Fly   313 --DSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLF 375
              .|..::::||.|..|||||.:.:..::|..:...||  ...:.|.||.:.::.::..|.::..
plant   515 EATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDT--TSFQQVACGQSITVALSMSGQVYAM 577

  Fly   376 GQNKKTGEANMYPKPVQDLSGWN-ITDIGCANTSI-MISADDTLIAWGASPTFGELGIGEFQKSS 438
            |....:.:....|..::...|.: :.::.|....| ::::...:..||.... |:||.|: .:..
plant   578 GTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSN-GQLGHGD-TEYR 640

  Fly   439 TVPKEVPKLDNIKIPQVTMGYSHTVLL 465
            .:|..|..|...::.:|..|.::|..:
plant   641 CMPTLVKALKGKQVRKVVCGSNYTATI 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 10/44 (23%)
RCC1_2 171..200 CDD:290274 9/30 (30%)
RCC1 188..236 CDD:278826 14/51 (27%)
RCC1 239..312 CDD:278826 17/72 (24%)
RCC1 317..366 CDD:278826 14/48 (29%)
RCC1 414..465 CDD:278826 12/50 (24%)
AT3G47660NP_001325559.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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