DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT3G23270

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001327882.1 Gene:AT3G23270 / 821906 AraportID:AT3G23270 Length:1054 Species:Arabidopsis thaliana


Alignment Length:360 Identity:87/360 - (24%)
Similarity:152/360 - (42%) Gaps:57/360 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVY 191
            |..|:....:...:|....|:||....:.:: :|.::..|...||...|.|.:||..::.:|.::
plant   266 HVALVTRQGEVFTWGEEVGGRLGHGIQVDIS-RPKLVEFLALTNIDFVACGEYHTCVVSTSGDLF 329

  Fly   192 ACGE--NKSGQCGVGNTHANIYSPTPINYRGP----PIIRIGCGAEFSVILDIKGSLHTFGLPEY 250
            :.|:  :..|..|.|   ::|....|....||    .::.:.||...|.:....|.|.|||...:
plant   330 SWGDGIHNVGLLGHG---SDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAF 391

  Fly   251 GQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAI--- 312
            |.|||.       |...:|:     ||:            |..::|::.|..||...||.||   
plant   392 GVLGHG-------NRESVSY-----PKE------------VQSLNGLKTVKVACSIWHTAAIVEV 432

  Fly   313 -------DSKKRVYSWGFGGFGRLGHAEPKDEMVPR-LMKFFDTQGRGGRSVFCGSTFSLIVNEL 369
                   .|.:::::||.|...||||...:..::|. :....|   .....:.||.||::.:...
plant   433 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLID---YNFHKIACGHTFTVALTTS 494

  Fly   370 GLLFLFG--QNKKTGEA---NMYPKPVQD-LSGWNITDIGC-ANTSIMISADDTLIAWGASPTFG 427
            |.:|..|  .:.:.|.:   ...|..||| |.|..:.:|.| |:...::::...:..||.... |
plant   495 GHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGAN-G 558

  Fly   428 ELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHT 462
            .||.|:.:...| |..|..|.:..:..::.|.:.|
plant   559 RLGHGDTEDKRT-PTLVEALRDRHVKSLSCGSNFT 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 12/44 (27%)
RCC1_2 171..200 CDD:290274 7/30 (23%)
RCC1 188..236 CDD:278826 12/53 (23%)
RCC1 239..312 CDD:278826 20/72 (28%)
RCC1 317..366 CDD:278826 13/49 (27%)
RCC1 414..465 CDD:278826 12/49 (24%)
AT3G23270NP_001327882.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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